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project(
'spoa',
['cpp'],
version : '4.1.5',
default_options : [
'buildtype=release',
'warning_level=3',
'cpp_std=c++17',
'b_ndebug=if-release'],
license : 'MIT',
meson_version : '>=0.60.0'
)
################
# Dependencies #
################
spoa_lib_flags = []
spoa_lib_deps = []
if get_option('cereal')
# cereal
spoa_cereal_dep = dependency('cereal', version : '>= 1.3.0', fallback : ['cereal', 'cereal_dep'])
spoa_lib_flags += '-DSPOA_USE_CEREAL'
spoa_lib_deps += spoa_cereal_dep
endif
if (not meson.is_subproject()) and (get_option('exe') or get_option('tests'))
# biosoup
spoa_biosoup_dep = dependency('biosoup', version : '>= 0.11.0', fallback : ['biosoup', 'biosoup_dep'])
# bioparser
spoa_bioparser_dep = dependency('bioparser', version : '>= 3.1.0', fallback : ['bioparser', 'bioparser_dep'])
endif
if not get_option('dispatch')
if get_option('sse41')
spoa_lib_flags += '-msse4.1'
elif get_option('avx2')
spoa_lib_flags += '-mavx2'
endif
endif
if (get_option('simde') or
get_option('simde_nonvec') or
get_option('simde_openmp') or
get_option('dispatch'))
# simde
spoa_simde_dep = dependency('simde', version : '>= 0.7.6', fallback : ['simde', 'simde_dep'])
add_project_arguments('-DSIMDE_ENABLE_NATIVE_ALIASES', language : ['c', 'cpp'])
spoa_lib_flags += '-DSPOA_USE_SIMDE'
spoa_lib_deps += spoa_simde_dep
if get_option('simde_nonvec')
add_project_arguments('-DSIMDE_NO_NATIVE', language : ['c', 'cpp'])
endif
if get_option('simde_openmp')
add_project_arguments('-DSIMDE_ENABLE_OPENMP', language : ['c', 'cpp'])
spoa_lib_flags += '-fopenmp-simd'
endif
if get_option('dispatch')
spoa_lib_flags += '-DSPOA_GENERATE_DISPATCH_CPUIDEX'
endif
endif
###########
# Headers #
###########
subdir('include')
###########
# Sources #
###########
subdir('src')
#########
# Tests #
#########
if (not meson.is_subproject()) and get_option('tests')
# gtest
spoa_gtest_dep = dependency('gtest', version : '>= 1.10.0', main : true, fallback : ['gtest', 'gtest_main_dep'])
subdir('test')
endif
###################
# Dependency info #
###################
if (not meson.is_subproject())
import('pkgconfig').generate(
spoa_lib,
name : 'spoa',
version : meson.project_version(),
filebase : 'spoa',
description : 'C++ tool/library for SIMD vectorized partial order alignment.')
endif
spoa_dep = declare_dependency(
include_directories : spoa_include_directories,
link_with : spoa_lib,
dependencies : spoa_lib_deps,
version : meson.project_version()
)
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