1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157
|
/* compressPerm.c */
#include "../Perm.h"
#include "../../timings.h"
/*--------------------------------------------------------------------*/
int
main ( int argc, char *argv[] )
/*
----------------------------------------------------
read in a permutation and an equivalence map vector.
created the permutation for the compressed graph.
created -- 96may02, cca
----------------------------------------------------
*/
{
char *inIVfileName, *inPermFileName, *outPermFileName ;
double t1, t2 ;
int msglvl, rc ;
IV *eqmapIV ;
Perm *perm, *perm2 ;
FILE *msgFile ;
if ( argc != 6 ) {
fprintf(stdout,
"\n\n usage : %s msglvl msgFile inPermFile inMapFile outPermFile"
"\n msglvl -- message level"
"\n msgFile -- message file"
"\n inPermFile -- input file, must be *.permf or *.permb"
"\n inMapFile -- input file, must be *.ivf or *.ivb"
"\n outPermFile -- output file, must be *.permf or *.permb"
"\n", argv[0]) ;
return(0) ;
}
msglvl = atoi(argv[1]) ;
if ( strcmp(argv[2], "stdout") == 0 ) {
msgFile = stdout ;
} else if ( (msgFile = fopen(argv[2], "a")) == NULL ) {
fprintf(stderr, "\n fatal error in %s"
"\n unable to open file %s\n",
argv[0], argv[2]) ;
return(-1) ;
}
inPermFileName = argv[3] ;
inIVfileName = argv[4] ;
outPermFileName = argv[5] ;
fprintf(msgFile,
"\n %s "
"\n msglvl -- %d"
"\n msgFile -- %s"
"\n inPermFile -- %s"
"\n inMapFile -- %s"
"\n outPermFile -- %s"
"\n",
argv[0], msglvl, argv[2], inPermFileName, inIVfileName,
outPermFileName) ;
fflush(msgFile) ;
/*
-----------------------
read in the Perm object
-----------------------
*/
if ( strcmp(inPermFileName, "none") == 0 ) {
fprintf(msgFile, "\n no file to read from") ;
exit(0) ;
}
perm = Perm_new() ;
MARKTIME(t1) ;
rc = Perm_readFromFile(perm, inPermFileName) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %9.5f : read in perm from file %s",
t2 - t1, inPermFileName) ;
if ( rc != 1 ) {
fprintf(msgFile, "\n return value %d from Perm_readFromFile(%p,%s)",
rc, perm, inPermFileName) ;
exit(-1) ;
}
fprintf(msgFile, "\n\n after reading Perm object from file %s",
inPermFileName) ;
if ( msglvl > 2 ) {
Perm_writeForHumanEye(perm, msgFile) ;
} else {
Perm_writeStats(perm, msgFile) ;
}
fflush(msgFile) ;
/*
-------------------------
read in the IV map object
-------------------------
*/
if ( strcmp(inIVfileName, "none") == 0 ) {
fprintf(msgFile, "\n no file to read from") ;
exit(0) ;
}
eqmapIV = IV_new() ;
MARKTIME(t1) ;
rc = IV_readFromFile(eqmapIV, inIVfileName) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %9.5f : read in eqmapIV from file %s",
t2 - t1, inIVfileName) ;
if ( rc != 1 ) {
fprintf(msgFile, "\n return value %d from IV_readFromFile(%p,%s)",
rc, eqmapIV, inIVfileName) ;
exit(-1) ;
}
fprintf(msgFile, "\n\n after reading IV object from file %s",
inIVfileName) ;
if ( msglvl > 2 ) {
IV_writeForHumanEye(eqmapIV, msgFile) ;
} else {
IV_writeStats(eqmapIV, msgFile) ;
}
fflush(msgFile) ;
/*
-------------------------------------
get the compressed permutation object
-------------------------------------
*/
perm2 = Perm_compress(perm, eqmapIV) ;
fprintf(msgFile, "\n\n compressed Perm object") ;
if ( msglvl > 2 ) {
Perm_writeForHumanEye(perm2, msgFile) ;
} else {
Perm_writeStats(perm2, msgFile) ;
}
/*
-------------------------
write out the Perm object
-------------------------
*/
if ( strcmp(outPermFileName, "none") != 0 ) {
MARKTIME(t1) ;
rc = Perm_writeToFile(perm2, outPermFileName) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %9.5f : write perm to file %s",
t2 - t1, outPermFileName) ;
}
if ( rc != 1 ) {
fprintf(msgFile, "\n return value %d from Perm_writeToFile(%p,%s)",
rc, perm2, outPermFileName) ;
}
/*
----------------
free the objects
----------------
*/
Perm_free(perm) ;
IV_free(eqmapIV) ;
Perm_free(perm2) ;
fprintf(msgFile, "\n") ;
fclose(msgFile) ;
return(1) ; }
/*--------------------------------------------------------------------*/
|