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//
#include <ios>
#include <iostream>
#include <fstream>
#include <sstream>
#include <string>
#include <stddef.h>
#include <SRF_Container.hh>
#include <SRF_ReadSet.hh>
#include <SRF_Read.hh>
#include <SRF_File.hh>
#include <stdio.h>
#include <string.h>
#include <stdlib.h>
#include <io_lib/Read.h>
#include <io_lib/misc.h>
#include <io_lib/hash_table.h>
#include <io_lib/ztr.h>
#include <zlib.h>
template <class T>
std::string to_string(T t, std::ios_base & (*f)(std::ios_base&))
{
std::ostringstream oss;
oss << f << t;
return oss.str();
}
int main(int argc, char* argv[])
{
if ( argc != 2 )
{
std::cout << "Usage: reader <input file>\n";
exit(1);
}
SRF_File::openType mode = SRF_File::openTypeRead;
SRF_File file( argv[1], mode );
SRF_Container* container = file.getCurrentContainer();
if ( container == NULL )
{
SRF_ReportError( "error opening container" );
exit (1);
}
container->dump();
SRF_ReadSet* readSet = container->firstReadSet( file.getFile() );
if ( readSet == NULL )
{
SRF_ReportError( "error opening readset" );
exit (1);
}
readSet->dump();
SRF_Read* read = NULL;
while ( ( read = readSet->getRead( file.getFile() )) != NULL )
{
read->dump();
}
return 0;
}
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