1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
|
Source: sspace
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>,
Sascha Steinbiss <satta@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 9),
recode,
python,
asciidoctor,
bowtie
Standards-Version: 3.9.8
Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/sspace.git
Vcs-Git: https://anonscm.debian.org/git/debian-med/sspace.git
Homepage: https://github.com/nsoranzo/sspace_basic
Package: sspace
Architecture: all
Depends: ${perl:Depends},
${misc:Depends},
python,
bowtie
Description: scaffolding pre-assembled contigs after extension
SSAKE-based Scaffolding of Pre-Assembled Contigs after Extension (SSPACE)
is a script able to extend and scaffold pre-assembled contigs using one or
more mate pairs or paired-end libraries, or even a combination.
.
SSPACE is built based on SSAKE. Code of SSAKE is changed to be able to
extend and scaffold pre-assembled contigs for multiple paired reads
libraries.
.
This is the free 'basic' version of SSPACE. The non-free 'standard' version is
available directly from Baseclear.
|
