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#!/usr/bin/make -f
# Uncomment this to turn on verbose mode.
#export DH_VERBOSE=1
export DEB_BUILD_MAINT_OPTIONS = hardening=+all
include /usr/share/dpkg/default.mk
%:
dh $@ --with python2
# override_dh_auto_install:
# dh_auto_install --destdir=debian/tmp
override_dh_auto_configure:
dh_auto_configure -- --enable-sparsehash --enable-bam \
--with-bam-include-path=/usr/include/samtools \
--with-bam-lib-path=/usr/lib
override_dh_install:
cp php/constants.php.dist ./constants.php
dh_install
# Skip this bit if not building stacks
! cd debian/$(DEB_SOURCE)/usr/lib/$(DEB_SOURCE)/bin || \
for f in *.pl ; do \
ln -s "$$f" "`basename $$f .pl`" ; \
sed -i '1s?^#!/usr/bin/env.*perl?#!/usr/bin/perl?' $$f ; \
done
# Skip this bit if not building stacks-web
# Note - directory perms will be set in postinst
dh_installdirs -pstacks-web /var/lib/stacks/export
if [ -e debian/stacks-web/usr/share/stacks/php ] ; then \
rmdir debian/stacks-web/usr/share/stacks/php/export ; \
ln -s /var/lib/stacks/export \
debian/stacks-web/usr/share/stacks/php/export ; \
fi
override_dh_link:
dh_link
mkdir -p debian/$(DEB_SOURCE)/usr/lib/debian-med/bin
cd debian/$(DEB_SOURCE)/usr/lib/debian-med/bin && \
for f in `ls $(CURDIR)/debian/$(DEB_SOURCE)/usr/lib/$(DEB_SOURCE)/bin` ; do \
ln -s ../../$(DEB_SOURCE)/bin/$$f ; \
done
override_dh_auto_test:
#ln -s /usr/share/automake-1.14/tap-driver.sh tests/tap-driver.sh
#dh_auto_test
# Does not work even after this trick. See
# https://groups.google.com/forum/#!msg/stacks-users/TA2tMEqb4Mg/pQy4fUCYi9kJ
true
override_dh_clean:
dh_clean
rm -f ./constants.php
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