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Source: staden-io-lib
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy@debian.org>,
Andreas Tille <tille@debian.org>,
Thorsten Alteholz <debian@alteholz.de>,
Michael R. Crusoe <crusoe@debian.org>
Section: science
Priority: optional
Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13),
zlib1g-dev,
libcurl4-gnutls-dev | libcurl4-nss-dev,
libhtscodecs-dev,
d-shlibs (>= 0.106),
libbz2-dev,
liblzma-dev
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/staden-io-lib
Vcs-Git: https://salsa.debian.org/med-team/staden-io-lib.git
Homepage: https://github.com/jkbonfield/io_lib
Rules-Requires-Root: no
Package: staden-io-lib-utils
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends}
Suggests: staden-io-lib-examples
Description: programs for manipulating DNA sequencing files
The io_lib from the Staden package is a library of file reading and writing
code to provide a general purpose trace file (and Experiment File) reading
interface. It has been compiled and tested on a variety of unix systems,
MacOS X and MS Windows.
.
This package contains the programs that are distributed with the Staden io_lib
for manipulating and converting sequencing data files, and in particular files
to manipulate short reads generated by second and third generation sequencers
and stored in SRF format.
Package: libstaden-read-dev
Architecture: any
Section: libdevel
Depends: libstaden-read14t64 (= ${binary:Version}),
${misc:Depends},
${devlibs:Depends}
Description: development files for libstaden-read
This package contains the header and development files needed to build
programs and packages using the Staden io_lib.
.
The io_lib from the Staden package is a library of file reading and writing
code to provide a general purpose trace file (and Experiment File) reading
interface. It has been compiled and tested on a variety of unix systems,
MacOS X and MS Windows.
Package: libstaden-read14t64
Provides: ${t64:Provides}
Replaces: libstaden-read14
Conflicts: libstaden-read14 (<< ${source:Version})
Architecture: any
Multi-Arch: same
Section: libs
Depends: ${shlibs:Depends},
${misc:Depends}
Description: Staden library for reading and writing DNA sequencing results
This package contains the Staden io_lib, that is renamed in Debian and
Fedora ‘staden-read’ instead of ‘read’. This library supports various DNA
sequence read formats, in particular SCF, ABI, ALF, CTF, ZTR, SFF and SRF.
.
The io_lib from the Staden package is a library of file reading and writing
code to provide a general purpose trace file (and Experiment File) reading
interface. It has been compiled and tested on a variety of unix systems,
MacOS X and MS Windows.
Package: staden-io-lib-examples
Architecture: all
Multi-Arch: foreign
Depends: ${misc:Depends}
Recommends: staden-io-lib-utils
Description: programs for manipulating DNA sequencing files (usage examples)
The io_lib from the Staden package is a library of file reading and writing
code to provide a general purpose trace file (and Experiment File) reading
interface. It has been compiled and tested on a variety of unix systems,
MacOS X and MS Windows.
.
This package contains the programs that are distributed with the Staden io_lib
for manipulating and converting sequencing data files, and in particular files
to manipulate short reads generated by second and third generation sequencers
and stored in SRF format.
.
This package contains example data and a test suite to test the data.
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