1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24
|
int Plot_Base_Comp(int win_len,
int *score,
char *seq,
int seq_len,
int start,
int end,
int *match,
int *max_match);
int
get_base_comp_res(char seq[], int seq_length,
int window_length, /* sum over all windows this length */
int user_start, /* seq start numbering from 1 */
int user_end, /* seq end numbering from 1 */
double score[], /* score for each base type */
double result[], /* put results here */
double *min, /* min result */
double *max); /* max result */
double get_base_comp_mass(int a, int c, int g, int t);
void get_aa_comp (char *seq, int seq_length, double aa_comp[25]);
void get_aa_comp_mass(double *aa_comp, double *mass);
|