File: cholesky_tag.c

package info (click to toggle)
starpu-contrib 1.0.1%2Bdfsg-1
  • links: PTS, VCS
  • area: contrib
  • in suites: wheezy
  • size: 13,836 kB
  • sloc: ansic: 77,357; cpp: 23,334; sh: 12,088; makefile: 2,086; lisp: 758; yacc: 185; sed: 126; fortran: 13
file content (407 lines) | stat: -rw-r--r-- 8,780 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
/* StarPU --- Runtime system for heterogeneous multicore architectures.
 *
 * Copyright (C) 2009-2012  Université de Bordeaux 1
 * Copyright (C) 2010  Mehdi Juhoor <mjuhoor@gmail.com>
 * Copyright (C) 2010, 2011, 2012  Centre National de la Recherche Scientifique
 *
 * StarPU is free software; you can redistribute it and/or modify
 * it under the terms of the GNU Lesser General Public License as published by
 * the Free Software Foundation; either version 2.1 of the License, or (at
 * your option) any later version.
 *
 * StarPU is distributed in the hope that it will be useful, but
 * WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
 *
 * See the GNU Lesser General Public License in COPYING.LGPL for more details.
 */

#include "cholesky.h"

/*
 *	Some useful functions
 */

static struct starpu_task *create_task(starpu_tag_t id)
{
	struct starpu_task *task = starpu_task_create();
		task->cl_arg = NULL;
		task->use_tag = 1;
		task->tag_id = id;

	return task;
}

/*
 *	Create the codelets
 */

static struct starpu_codelet cl11 =
{
	.modes = { STARPU_RW },
	.where = STARPU_CPU|STARPU_CUDA,
	.cpu_funcs = {chol_cpu_codelet_update_u11, NULL},
#ifdef STARPU_USE_CUDA
	.cuda_funcs = {chol_cublas_codelet_update_u11, NULL},
#endif
	.nbuffers = 1,
	.model = &chol_model_11
};

static struct starpu_task * create_task_11(starpu_data_handle_t dataA, unsigned k)
{
/*	FPRINTF(stdout, "task 11 k = %d TAG = %llx\n", k, (TAG11(k))); */

	struct starpu_task *task = create_task(TAG11(k));

	task->cl = &cl11;

	/* which sub-data is manipulated ? */
	task->handles[0] = starpu_data_get_sub_data(dataA, 2, k, k);

	/* this is an important task */
	if (!noprio)
		task->priority = STARPU_MAX_PRIO;

	/* enforce dependencies ... */
	if (k > 0)
	{
		starpu_tag_declare_deps(TAG11(k), 1, TAG22(k-1, k, k));
	}

	return task;
}

static struct starpu_codelet cl21 =
{
	.modes = { STARPU_R, STARPU_RW },
	.where = STARPU_CPU|STARPU_CUDA,
	.cpu_funcs = {chol_cpu_codelet_update_u21, NULL},
#ifdef STARPU_USE_CUDA
	.cuda_funcs = {chol_cublas_codelet_update_u21, NULL},
#endif
	.nbuffers = 2,
	.model = &chol_model_21
};

static void create_task_21(starpu_data_handle_t dataA, unsigned k, unsigned j)
{
	struct starpu_task *task = create_task(TAG21(k, j));

	task->cl = &cl21;

	/* which sub-data is manipulated ? */
	task->handles[0] = starpu_data_get_sub_data(dataA, 2, k, k);
	task->handles[1] = starpu_data_get_sub_data(dataA, 2, k, j);

	if (!noprio && (j == k+1))
	{
		task->priority = STARPU_MAX_PRIO;
	}

	/* enforce dependencies ... */
	if (k > 0)
	{
		starpu_tag_declare_deps(TAG21(k, j), 2, TAG11(k), TAG22(k-1, k, j));
	}
	else
	{
		starpu_tag_declare_deps(TAG21(k, j), 1, TAG11(k));
	}

	int ret = starpu_task_submit(task);
        if (STARPU_UNLIKELY(ret == -ENODEV))
	{
                FPRINTF(stderr, "No worker may execute this task\n");
                exit(0);
        }

}

static struct starpu_codelet cl22 =
{
	.modes = { STARPU_R, STARPU_R, STARPU_RW },
	.where = STARPU_CPU|STARPU_CUDA,
	.cpu_funcs = {chol_cpu_codelet_update_u22, NULL},
#ifdef STARPU_USE_CUDA
	.cuda_funcs = {chol_cublas_codelet_update_u22, NULL},
#endif
	.nbuffers = 3,
	.model = &chol_model_22
};

static void create_task_22(starpu_data_handle_t dataA, unsigned k, unsigned i, unsigned j)
{
/*	FPRINTF(stdout, "task 22 k,i,j = %d,%d,%d TAG = %llx\n", k,i,j, TAG22(k,i,j)); */

	struct starpu_task *task = create_task(TAG22(k, i, j));

	task->cl = &cl22;

	/* which sub-data is manipulated ? */
	task->handles[0] = starpu_data_get_sub_data(dataA, 2, k, i);
	task->handles[1] = starpu_data_get_sub_data(dataA, 2, k, j);
	task->handles[2] = starpu_data_get_sub_data(dataA, 2, i, j);

	if (!noprio && (i == k + 1) && (j == k +1) )
	{
		task->priority = STARPU_MAX_PRIO;
	}

	/* enforce dependencies ... */
	if (k > 0)
	{
		starpu_tag_declare_deps(TAG22(k, i, j), 3, TAG22(k-1, i, j), TAG21(k, i), TAG21(k, j));
	}
	else
	{
		starpu_tag_declare_deps(TAG22(k, i, j), 2, TAG21(k, i), TAG21(k, j));
	}

	int ret = starpu_task_submit(task);
        if (STARPU_UNLIKELY(ret == -ENODEV))
	{
                FPRINTF(stderr, "No worker may execute this task\n");
                exit(0);
        }
}



/*
 *	code to bootstrap the factorization
 *	and construct the DAG
 */

static void _cholesky(starpu_data_handle_t dataA, unsigned nblocks)
{
	struct timeval start;
	struct timeval end;

	struct starpu_task *entry_task = NULL;

	/* create all the DAG nodes */
	unsigned i,j,k;

	gettimeofday(&start, NULL);

	for (k = 0; k < nblocks; k++)
	{
		struct starpu_task *task = create_task_11(dataA, k);
		/* we defer the launch of the first task */
		if (k == 0)
		{
			entry_task = task;
		}
		else
		{
			int ret = starpu_task_submit(task);
                        if (STARPU_UNLIKELY(ret == -ENODEV))
			{
                                FPRINTF(stderr, "No worker may execute this task\n");
                                exit(0);
                        }

		}

		for (j = k+1; j<nblocks; j++)
		{
			create_task_21(dataA, k, j);

			for (i = k+1; i<nblocks; i++)
			{
				if (i <= j)
					create_task_22(dataA, k, i, j);
			}
		}
	}

	/* schedule the codelet */
	int ret = starpu_task_submit(entry_task);
        if (STARPU_UNLIKELY(ret == -ENODEV))
	{
                FPRINTF(stderr, "No worker may execute this task\n");
                exit(0);
        }


	/* stall the application until the end of computations */
	starpu_tag_wait(TAG11(nblocks-1));

	starpu_data_unpartition(dataA, 0);

	gettimeofday(&end, NULL);


	double timing = (double)((end.tv_sec - start.tv_sec)*1000000 + (end.tv_usec - start.tv_usec));
	FPRINTF(stderr, "Computation took (in ms)\n");
	FPRINTF(stdout, "%2.2f\n", timing/1000);

	unsigned n = starpu_matrix_get_nx(dataA);

	double flop = (1.0f*n*n*n)/3.0f;
	FPRINTF(stderr, "Synthetic GFlops : %2.2f\n", (flop/timing/1000.0f));
}

static int initialize_system(float **A, unsigned dim, unsigned pinned)
{
	int ret;

	ret = starpu_init(NULL);
	if (ret == -ENODEV)
		return 77;
	STARPU_CHECK_RETURN_VALUE(ret, "starpu_init");

	starpu_helper_cublas_init();

	if (pinned)
	{
		starpu_malloc((void **)A, (size_t)dim*dim*sizeof(float));
	}
	else
	{
		*A = malloc(dim*dim*sizeof(float));
	}
	return 0;
}

static void cholesky(float *matA, unsigned size, unsigned ld, unsigned nblocks)
{
	starpu_data_handle_t dataA;

	/* monitor and partition the A matrix into blocks :
	 * one block is now determined by 2 unsigned (i,j) */
	starpu_matrix_data_register(&dataA, 0, (uintptr_t)matA, ld, size, size, sizeof(float));

	starpu_data_set_sequential_consistency_flag(dataA, 0);

	struct starpu_data_filter f =
	{
		.filter_func = starpu_vertical_block_filter_func,
		.nchildren = nblocks
	};

	struct starpu_data_filter f2 =
	{
		.filter_func = starpu_block_filter_func,
		.nchildren = nblocks
	};

	starpu_data_map_filters(dataA, 2, &f, &f2);

	_cholesky(dataA, nblocks);

	starpu_data_unregister(dataA);
}

static void shutdown_system(float **matA, unsigned pinned)
{
	if (pinned)
	{
		starpu_free(*matA);
	}
	else
	{
		free(*matA);
	}

	starpu_helper_cublas_shutdown();
	starpu_shutdown();
}

int main(int argc, char **argv)
{
	/* create a simple definite positive symetric matrix example
	 *
	 *	Hilbert matrix : h(i,j) = 1/(i+j+1)
	 * */

	parse_args(argc, argv);

	float *mat;
	int ret = initialize_system(&mat, size, pinned);
	if (ret) return ret;

	unsigned i,j;
	for (i = 0; i < size; i++)
	{
		for (j = 0; j < size; j++)
		{
			mat[j +i*size] = (1.0f/(1.0f+i+j)) + ((i == j)?1.0f*size:0.0f);
			/* mat[j +i*size] = ((i == j)?1.0f*size:0.0f); */
		}
	}


#ifdef CHECK_OUTPUT
	FPRINTF(stdout, "Input :\n");

	for (j = 0; j < size; j++)
	{
		for (i = 0; i < size; i++)
		{
			if (i <= j)
			{
				FPRINTF(stdout, "%2.2f\t", mat[j +i*size]);
			}
			else
			{
				FPRINTF(stdout, ".\t");
			}
		}
		FPRINTF(stdout, "\n");
	}
#endif


	cholesky(mat, size, size, nblocks);

#ifdef CHECK_OUTPUT
	FPRINTF(stdout, "Results :\n");

	for (j = 0; j < size; j++)
	{
		for (i = 0; i < size; i++)
		{
			if (i <= j)
			{
				FPRINTF(stdout, "%2.2f\t", mat[j +i*size]);
			}
			else
			{
				FPRINTF(stdout, ".\t");
				mat[j+i*size] = 0.0f; /* debug */
			}
		}
		FPRINTF(stdout, "\n");
	}

	FPRINTF(stderr, "compute explicit LLt ...\n");
	float *test_mat = malloc(size*size*sizeof(float));
	STARPU_ASSERT(test_mat);

	SSYRK("L", "N", size, size, 1.0f,
				mat, size, 0.0f, test_mat, size);

	FPRINTF(stderr, "comparing results ...\n");
	for (j = 0; j < size; j++)
	{
		for (i = 0; i < size; i++)
		{
			if (i <= j)
			{
				FPRINTF(stdout, "%2.2f\t", test_mat[j +i*size]);
			}
			else
			{
				FPRINTF(stdout, ".\t");
			}
		}
		FPRINTF(stdout, "\n");
	}
	free(test_mat);
#endif

	shutdown_system(&mat, pinned);
	return 0;
}