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|
//------------------------------------------------------------------------------
// GB_subassign_06n: C(I,J)<M> = A ; no S
//------------------------------------------------------------------------------
// SuiteSparse:GraphBLAS, Timothy A. Davis, (c) 2017-2022, All Rights Reserved.
// SPDX-License-Identifier: Apache-2.0
//------------------------------------------------------------------------------
// Method 06n: C(I,J)<M> = A ; no S
// M: present
// Mask_comp: false
// C_replace: false
// accum: NULL
// A: matrix
// S: none (see also GB_subassign_06s)
// FULL: if A and C are dense, then C remains dense.
// If A is sparse and C dense, C will likely become sparse, except if M(i,j)=0
// wherever A(i,j) is not present. So if M==A is aliased and A is sparse, then
// C remains dense. Need C(I,J)<A,struct>=A kernel. Then in that case, if C
// is dense it remains dense, even if A is sparse. If that change is made,
// this kernel can start with converting C to sparse if A is sparse.
// C is not bitmap: GB_bitmap_assign is used if C is bitmap.
// M and A are not bitmap: 06s is used instead, if M or A are bitmap.
#include "GB_subassign_methods.h"
GrB_Info GB_subassign_06n
(
GrB_Matrix C,
// input:
const GrB_Index *I,
const int64_t nI,
const int Ikind,
const int64_t Icolon [3],
const GrB_Index *J,
const int64_t nJ,
const int Jkind,
const int64_t Jcolon [3],
const GrB_Matrix M,
const bool Mask_struct,
const GrB_Matrix A,
GB_Context Context
)
{
//--------------------------------------------------------------------------
// check inputs
//--------------------------------------------------------------------------
ASSERT (!GB_IS_BITMAP (C)) ; ASSERT (!GB_IS_FULL (C)) ;
ASSERT (!GB_IS_BITMAP (M)) ; // Method 06n is not used for M bitmap
ASSERT (!GB_IS_BITMAP (A)) ; // Method 06n is not used for A bitmap
ASSERT (!GB_aliased (C, M)) ; // NO ALIAS of C==M
ASSERT (!GB_aliased (C, A)) ; // NO ALIAS of C==A
ASSERT_MATRIX_OK (C, "C input for 06n", GB0) ;
ASSERT_MATRIX_OK (M, "M input for 06n", GB0) ;
ASSERT_MATRIX_OK (A, "A input for 06n", GB0) ;
//--------------------------------------------------------------------------
// get inputs
//--------------------------------------------------------------------------
GB_EMPTY_TASKLIST ;
GB_MATRIX_WAIT_IF_JUMBLED (C) ;
GB_MATRIX_WAIT_IF_JUMBLED (M) ;
GB_MATRIX_WAIT_IF_JUMBLED (A) ;
GB_GET_C ; // C must not be bitmap
int64_t zorig = C->nzombies ;
const int64_t Cnvec = C->nvec ;
const int64_t *restrict Ch = C->h ;
const int64_t *restrict Cp = C->p ;
const bool C_is_hyper = (Ch != NULL) ;
GB_GET_C_HYPER_HASH ;
GB_GET_MASK ;
GB_GET_A ;
const int64_t *restrict Ah = A->h ;
const int64_t Anvec = A->nvec ;
const bool A_is_hyper = (Ah != NULL) ;
GrB_BinaryOp accum = NULL ;
GB_OK (GB_hyper_hash_build (A, Context)) ;
const int64_t *restrict A_Yp = (A_is_hyper) ? A->Y->p : NULL ;
const int64_t *restrict A_Yi = (A_is_hyper) ? A->Y->i : NULL ;
const int64_t *restrict A_Yx = (A_is_hyper) ? A->Y->x : NULL ;
const int64_t A_hash_bits = (A_is_hyper) ? (A->Y->vdim - 1) : 0 ;
//--------------------------------------------------------------------------
// Method 06n: C(I,J)<M> = A ; no S
//--------------------------------------------------------------------------
// Time: O(nnz(M)*(log(a)+log(c)), where a and c are the # of entries in a
// vector of A and C, respectively. The entries in the intersection of M
// (where the entries are true) and the matrix addition C(I,J)+A must be
// examined. This method scans M, and searches for entries in A and C(I,J)
// using two binary searches. If M is very dense, this method can be
// slower than Method 06s. This method is selected if nnz (A) >= nnz (M).
// Compare with Methods 05 and 07, which use a similar algorithmic outline
// and parallelization strategy.
//--------------------------------------------------------------------------
// Parallel: slice M into coarse/fine tasks (Method 05, 06n, 07)
//--------------------------------------------------------------------------
GB_SUBASSIGN_ONE_SLICE (M) ; // M cannot be jumbled
//--------------------------------------------------------------------------
// phase 1: create zombies, update entries, and count pending tuples
//--------------------------------------------------------------------------
#pragma omp parallel for num_threads(nthreads) schedule(dynamic,1) \
reduction(+:nzombies)
for (taskid = 0 ; taskid < ntasks ; taskid++)
{
//----------------------------------------------------------------------
// get the task descriptor
//----------------------------------------------------------------------
GB_GET_TASK_DESCRIPTOR_PHASE1 ;
//----------------------------------------------------------------------
// compute all vectors in this task
//----------------------------------------------------------------------
for (int64_t k = kfirst ; k <= klast ; k++)
{
//------------------------------------------------------------------
// get j, the kth vector of M
//------------------------------------------------------------------
int64_t j = GBH (Mh, k) ;
GB_GET_VECTOR (pM, pM_end, pA, pA_end, Mp, k, Mvlen) ;
int64_t mjnz = pM_end - pM ;
if (mjnz == 0) continue ;
//------------------------------------------------------------------
// get A(:,j)
//------------------------------------------------------------------
int64_t pA, pA_end ;
GB_LOOKUP_VECTOR (pA, pA_end, A, j) ;
int64_t ajnz = pA_end - pA ;
bool ajdense = (ajnz == Avlen) ;
int64_t pA_start = pA ;
//------------------------------------------------------------------
// get jC, the corresponding vector of C
//------------------------------------------------------------------
GB_LOOKUP_VECTOR_jC (fine_task, taskid) ;
int64_t cjnz = pC_end - pC_start ;
if (cjnz == 0 && ajnz == 0) continue ;
bool cjdense = (cjnz == Cvlen) ;
//------------------------------------------------------------------
// C(I,jC)<M(:,j)> = A(:,j) ; no S
//------------------------------------------------------------------
if (cjdense && ajdense)
{
//--------------------------------------------------------------
// C(:,jC) and A(:,j) are both dense
//--------------------------------------------------------------
for ( ; pM < pM_end ; pM++)
{
//----------------------------------------------------------
// update C(iC,jC), but only if M(iA,j) allows it
//----------------------------------------------------------
if (GB_mcast (Mx, pM, msize))
{
int64_t iA = GBI (Mi, pM, Mvlen) ;
GB_iC_DENSE_LOOKUP ;
// find iA in A(:,j)
// A(:,j) is dense; no need for binary search
pA = pA_start + iA ;
ASSERT (GBI (Ai, pA, Avlen) == iA) ;
// ----[C A 1] or [X A 1]-----------------------
// [C A 1]: action: ( =A ): copy A to C, no acc
// [X A 1]: action: ( undelete ): zombie lives
GB_noaccum_C_A_1_matrix ;
}
}
}
else if (cjdense)
{
//--------------------------------------------------------------
// C(:,jC) is dense, A(:,j) is sparse
//--------------------------------------------------------------
for ( ; pM < pM_end ; pM++)
{
//----------------------------------------------------------
// update C(iC,jC), but only if M(iA,j) allows it
//----------------------------------------------------------
if (GB_mcast (Mx, pM, msize))
{
int64_t iA = GBI (Mi, pM, Mvlen) ;
GB_iC_DENSE_LOOKUP ;
// find iA in A(:,j)
bool aij_found ;
int64_t apright = pA_end - 1 ;
GB_BINARY_SEARCH (iA, Ai, pA, apright, aij_found) ;
if (!aij_found)
{
// C (iC,jC) is present but A (i,j) is not
// ----[C . 1] or [X . 1]---------------------------
// [C . 1]: action: ( delete ): becomes zombie
// [X . 1]: action: ( X ): still zombie
GB_DELETE_ENTRY ;
}
else
{
// ----[C A 1] or [X A 1]---------------------------
// [C A 1]: action: ( =A ): copy A to C, no accum
// [X A 1]: action: ( undelete ): zombie lives
GB_noaccum_C_A_1_matrix ;
}
}
}
}
else if (ajdense)
{
//--------------------------------------------------------------
// C(:,jC) is sparse, A(:,j) is dense
//--------------------------------------------------------------
for ( ; pM < pM_end ; pM++)
{
//----------------------------------------------------------
// update C(iC,jC), but only if M(iA,j) allows it
//----------------------------------------------------------
if (GB_mcast (Mx, pM, msize))
{
int64_t iA = GBI (Mi, pM, Mvlen) ;
// find C(iC,jC) in C(:,jC)
GB_iC_BINARY_SEARCH ;
// lookup iA in A(:,j)
pA = pA_start + iA ;
ASSERT (GBI (Ai, pA, Avlen) == iA) ;
if (cij_found)
{
// ----[C A 1] or [X A 1]---------------------------
// [C A 1]: action: ( =A ): copy A into C, no accum
// [X A 1]: action: ( undelete ): zombie lives
GB_noaccum_C_A_1_matrix ;
}
else
{
// C (iC,jC) is not present, A (i,j) is present
// ----[. A 1]--------------------------------------
// [. A 1]: action: ( insert )
task_pending++ ;
}
}
}
}
else
{
//--------------------------------------------------------------
// C(:,jC) and A(:,j) are both sparse
//--------------------------------------------------------------
for ( ; pM < pM_end ; pM++)
{
//----------------------------------------------------------
// update C(iC,jC), but only if M(iA,j) allows it
//----------------------------------------------------------
if (GB_mcast (Mx, pM, msize))
{
int64_t iA = GBI (Mi, pM, Mvlen) ;
// find C(iC,jC) in C(:,jC)
GB_iC_BINARY_SEARCH ;
// find iA in A(:,j)
bool aij_found ;
int64_t apright = pA_end - 1 ;
GB_BINARY_SEARCH (iA, Ai, pA, apright, aij_found) ;
if (cij_found && aij_found)
{
// ----[C A 1] or [X A 1]---------------------------
// [C A 1]: action: ( =A ): copy A into C, no accum
// [X A 1]: action: ( undelete ): zombie lives
GB_noaccum_C_A_1_matrix ;
}
else if (!cij_found && aij_found)
{
// C (iC,jC) is not present, A (i,j) is present
// ----[. A 1]--------------------------------------
// [. A 1]: action: ( insert )
task_pending++ ;
}
else if (cij_found && !aij_found)
{
// C (iC,jC) is present but A (i,j) is not
// ----[C . 1] or [X . 1]---------------------------
// [C . 1]: action: ( delete ): becomes zombie
// [X . 1]: action: ( X ): still zombie
GB_DELETE_ENTRY ;
}
}
}
}
}
GB_PHASE1_TASK_WRAPUP ;
}
//--------------------------------------------------------------------------
// phase 2: insert pending tuples
//--------------------------------------------------------------------------
GB_PENDING_CUMSUM ;
zorig = C->nzombies ;
#pragma omp parallel for num_threads(nthreads) schedule(dynamic,1) \
reduction(&&:pending_sorted)
for (taskid = 0 ; taskid < ntasks ; taskid++)
{
//----------------------------------------------------------------------
// get the task descriptor
//----------------------------------------------------------------------
GB_GET_TASK_DESCRIPTOR_PHASE2 ;
//----------------------------------------------------------------------
// compute all vectors in this task
//----------------------------------------------------------------------
for (int64_t k = kfirst ; k <= klast ; k++)
{
//------------------------------------------------------------------
// get j, the kth vector of M
//------------------------------------------------------------------
int64_t j = GBH (Mh, k) ;
GB_GET_VECTOR (pM, pM_end, pA, pA_end, Mp, k, Mvlen) ;
int64_t mjnz = pM_end - pM ;
if (mjnz == 0) continue ;
//------------------------------------------------------------------
// get A(:,j)
//------------------------------------------------------------------
int64_t pA, pA_end ;
GB_LOOKUP_VECTOR (pA, pA_end, A, j) ;
int64_t ajnz = pA_end - pA ;
if (ajnz == 0) continue ;
bool ajdense = (ajnz == Avlen) ;
int64_t pA_start = pA ;
//------------------------------------------------------------------
// get jC, the corresponding vector of C
//------------------------------------------------------------------
GB_LOOKUP_VECTOR_jC (fine_task, taskid) ;
bool cjdense = ((pC_end - pC_start) == Cvlen) ;
//------------------------------------------------------------------
// C(I,jC)<M(:,j)> = A(:,j)
//------------------------------------------------------------------
if (!cjdense)
{
//--------------------------------------------------------------
// C(:,jC) is sparse; use binary search for C
//--------------------------------------------------------------
for ( ; pM < pM_end ; pM++)
{
//----------------------------------------------------------
// update C(iC,jC), but only if M(iA,j) allows it
//----------------------------------------------------------
if (GB_mcast (Mx, pM, msize))
{
int64_t iA = GBI (Mi, pM, Mvlen) ;
// find iA in A(:,j)
if (ajdense)
{
// A(:,j) is dense; no need for binary search
pA = pA_start + iA ;
ASSERT (GBI (Ai, pA, Avlen) == iA) ;
}
else
{
// A(:,j) is sparse; use binary search
int64_t apright = pA_end - 1 ;
bool aij_found ;
GB_BINARY_SEARCH (iA, Ai, pA, apright, aij_found) ;
if (!aij_found) continue ;
}
// find C(iC,jC) in C(:,jC)
GB_iC_BINARY_SEARCH ;
if (!cij_found)
{
// C (iC,jC) is not present, A (i,j) is present
// ----[. A 1]--------------------------------------
// [. A 1]: action: ( insert )
GB_PENDING_INSERT_aij ;
}
}
}
}
}
GB_PHASE2_TASK_WRAPUP ;
}
//--------------------------------------------------------------------------
// finalize the matrix and return result
//--------------------------------------------------------------------------
GB_SUBASSIGN_WRAPUP ;
}
|
