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//------------------------------------------------------------------------------
// LAGraph.h: user-visible include file for LAGraph
//------------------------------------------------------------------------------
// LAGraph, (c) 2019-2023 by The LAGraph Contributors, All Rights Reserved.
// SPDX-License-Identifier: BSD-2-Clause
//
// For additional details (including references to third party source code and
// other files) see the LICENSE file or contact permission@sei.cmu.edu. See
// Contributors.txt for a full list of contributors. Created, in part, with
// funding and support from the U.S. Government (see Acknowledgments.txt file).
// DM22-0790
//------------------------------------------------------------------------------
// LAGraph is a package of graph algorithms based on GraphBLAS. GraphBLAS
// defines a set of sparse matrix operations on an extended algebra of
// semirings, using an almost unlimited variety of operators and types. When
// applied to sparse adjacency matrices, these algebraic operations are
// equivalent to computations on graphs. GraphBLAS provides a powerful and
// expressive framework creating graph algorithms based on the elegant
// mathematics of sparse matrix operations on a semiring.
// However, GraphBLAS itself does not have graph algorithms. The purpose of
// LAGraph is to provide a robust, easy-to-use high-performance library of
// graph algorithms that rely on GraphBLAS.
//------------------------------------------------------------------------------
#ifndef LAGRAPH_H
#define LAGRAPH_H
//==============================================================================
// LAGraph version
//==============================================================================
// See also the LAGraph_Version utility method, which returns these values.
// These definitions are derived from LAGraph/CMakeLists.txt.
#define LAGRAPH_DATE "Feb 20, 2025"
#define LAGRAPH_VERSION_MAJOR 1
#define LAGRAPH_VERSION_MINOR 1
#define LAGRAPH_VERSION_UPDATE 5
//==============================================================================
// include files and helper macros
//==============================================================================
#include <GraphBLAS.h>
#if defined ( _OPENMP )
#include <omp.h>
#endif
// LAGRAPH_MIN/MAX: suitable for integers, and non-NaN floating point
#define LAGRAPH_MIN(x,y) (((x) < (y)) ? (x) : (y))
#define LAGRAPH_MAX(x,y) (((x) > (y)) ? (x) : (y))
//==============================================================================
// GraphBLAS platform specifics
//==============================================================================
// GraphBLAS C API specification, OpenMP, and vanilla vs
// SuiteSparse:GraphBLAS GxB extensions.
#if ( GRB_VERSION < 2 )
#error "The GraphBLAS library must support the v2.0 C API Specification"
#endif
#if ( _MSC_VER && !__INTEL_COMPILER && LG_DLL )
#ifdef LG_LIBRARY
// compiling LAGraph itself, exporting symbols to user apps
#define LAGRAPH_PUBLIC __declspec ( dllexport )
#else
// compiling the user application, importing symbols from LAGraph
#define LAGRAPH_PUBLIC __declspec ( dllimport )
#endif
#else
// for other compilers
#define LAGRAPH_PUBLIC
#endif
#if defined ( __cplusplus )
// C++ does not have the restrict keyword
#define LAGRAPH_RESTRICT
#elif ( _MSC_VER && !__INTEL_COMPILER )
// Microsoft Visual Studio uses __restrict instead of restrict for C
#define LAGRAPH_RESTRICT __restrict
#else
// use the restrict keyword for ANSI C99 compilers
#define LAGRAPH_RESTRICT restrict
#endif
// vanilla vs SuiteSparse:
#if !defined ( LAGRAPH_VANILLA )
// by default, set LAGRAPH_VANILLA to false
#define LAGRAPH_VANILLA 0
#endif
#if ( !LAGRAPH_VANILLA ) && defined ( GxB_SUITESPARSE_GRAPHBLAS )
// use SuiteSparse, and its GxB* extensions
#if GxB_IMPLEMENTATION < GxB_VERSION (7,1,0)
#error "If using SuiteSparse::GraphBLAS, version 7.1.0 or later is required"
#endif
#define LAGRAPH_SUITESPARSE 1
#else
// use any GraphBLAS library (possibly SuiteSparse) but with no GxB*
#define LAGRAPH_SUITESPARSE 0
#endif
// maximum length of the name of a GrB type, including the null-terminator
#if LAGRAPH_SUITESPARSE
#define LAGRAPH_MAX_NAME_LEN GxB_MAX_NAME_LEN
#else
#define LAGRAPH_MAX_NAME_LEN 128
#endif
//==============================================================================
// LAGraph error handling: return values and msg string
//==============================================================================
/**
* Nearly all LAGraph methods return an int to denote their status, and
* have a final string (msg) that captures any error messages.
*
* LAGraph has a single function that does not follow this rule.
* @sphinxref{LAGraph_WallClockTime} has no error handling mechanism (it
* returns a value of type double, and does not have an final msg string
* parameter.
*
* All other methods return an int to denote their status: zero if they are
* successful (which is the value of GrB_SUCCESS), negative on error, or
* positive for an informational value (such as GrB_NO_VALUE). Integers in the
* range -999 to 999 are reserved for GraphBLAS GrB_Info return values:
*
* \rst_star{
* successful results:
* - GrB_SUCCESS = 0 // all is well
* - GrB_NO_VALUE = 1 // A(i,j) requested but not there
*
* errors:
* - GrB_UNINITIALIZED_OBJECT = -1 // object has not been initialized
* - GrB_NULL_POINTER = -2 // input pointer is NULL
* - GrB_INVALID_VALUE = -3 // generic error; some value is bad
* - GrB_INVALID_INDEX = -4 // row or column index is out of bounds
* - GrB_DOMAIN_MISMATCH = -5 // object domains are not compatible
* - GrB_DIMENSION_MISMATCH = -6 // matrix dimensions do not match
* - GrB_OUTPUT_NOT_EMPTY = -7 // output matrix already has values
* - GrB_NOT_IMPLEMENTED = -8 // method not implemented
* - GrB_PANIC = -101 // unknown error
* - GrB_OUT_OF_MEMORY = -102 // out of memory
* - GrB_INSUFFICIENT_SPACE = -103, // output array not large enough
* - GrB_INVALID_OBJECT = -104 // object is corrupted
* - GrB_INDEX_OUT_OF_BOUNDS = -105 // row or col index out of bounds
* - GrB_EMPTY_OBJECT = -106 // an object does not contain a value
* }
* LAGraph returns any errors it receives from GraphBLAS, and also uses the
* GrB_* error codes in these cases:
* - GrB_INVALID_INDEX: if a source node id is out of range
* - GrB_INVALID_VALUE: if an enum to select an option is out of range
* - GrB_NOT_IMPLEMENTED: if a type is not supported, or when SuiteSparse
* GraphBLAS is required.
*
* Summary of return values for all LAGraph functions that return int:
* - GrB_SUCCESS if successful
* - a negative GrB_Info value on error (in range -999 to -1)
* - a positive GrB_Info value if successful but with extra information
* (in range 1 to 999)
* - -1999 to -1000: a common LAGraph-specific error, see list above
* - 1000 to 1999: if successful, with extra LAGraph-specific information
* - <= -2000: an LAGraph error specific to a particular LAGraph method
* - >= 2000: an LAGraph warning specific to a particular LAGraph method
*
* Many LAGraph methods share common error cases, described below. These
* return values are in the range -1000 to -1999. Return values of -2000 or
* greater may be used by specific LAGraph methods, which denote errors not in
* the following list:
* \rst_star{
* - LAGRAPH_INVALID_GRAPH (-1000):
* The input graph is invalid; the details are given in the error msg
* string returned by the method.
* - LAGRAPH_SYMMETRIC_STRUCTURE_REQUIRED (-1001):
* The method requires an undirected graph, or a directed graph with
* an adjacency matrix that is known to have a symmetric structure.
* LAGraph_Cached_IsSymmetricStructure can be used to determine this
* cached property.
* - LAGRAPH_IO_ERROR (-1002):
* A file input or output method failed, or an input file has an
* incorrect format that cannot be parsed.
* - LAGRAPH_NOT_CACHED (-1003):
* Some methods require one or more cached properties to be computed
* before calling them (AT, out_degree, or in_degree. Use
* LAGraph_Cached_AT, LAGraph_Cached_OutDegree, and/or
* LAGraph_Cached_InDegree to compute them.
* - LAGRAPH_NO_SELF_EDGES_ALLOWED (-1004):
* Some methods requires that the graph have no self edges, which
* correspond to the entries on the diagonal of the adjacency matrix.
* If the G->nself_edges cached property is nonzero or unknown, this
* error condition is returned. Use LAGraph_Cached_NSelfEdges to
* compute G->nself_edges, or LAGraph_DeleteSelfEdges to remove all
* diagonal entries from G->A.
* - LAGRAPH_CONVERGENCE_FAILURE (-1005):
* An iterative process failed to converge to a good solution.
* - LAGRAPH_CACHE_NOT_NEEDED (1000):
* This is a warning, not an error. It is returned by
* LAGraph_Cached_* methods when asked to compute cached properties
* that are not needed. These include G->AT and G->in_degree for an
* undirected graph.
* }
*/
#define LAGRAPH_RETURN_VALUES
#define LAGRAPH_INVALID_GRAPH (-1000)
#define LAGRAPH_SYMMETRIC_STRUCTURE_REQUIRED (-1001)
#define LAGRAPH_IO_ERROR (-1002)
#define LAGRAPH_NOT_CACHED (-1003)
#define LAGRAPH_NO_SELF_EDGES_ALLOWED (-1004)
#define LAGRAPH_CONVERGENCE_FAILURE (-1005)
#define LAGRAPH_CACHE_NOT_NEEDED ( 1000)
/**
* All LAGraph functions (except for @sphinxref{LAGraph_WallClockTime})
* have a final msg parameter that is a pointer to a user-allocated string in
* which an algorithm-specific error message can be returned. If msg is NULL,
* no error message is returned. This is not itself an error condition, it
* just indicates that the caller does not need the message returned. If the
* message string is provided but no error occurs, an empty string is returned.
*
* LAGRAPH_MSG_LEN is the minimum required length of a message string.
*
* For example, the following call computes the breadth-first-search of an
* LAGraph_Graph G, starting at a given source node. It returns a status of
* zero if it succeeds and a negative value on failure.
*
* GrB_Vector level, parent ;
* char msg [LAGRAPH_MSG_LEN] ;
* int status = LAGr_BreadthFirstSearch (&level, &parent, G, src, msg) ;
* if (status < 0)
* {
* printf ("status %d, error: %s\n", status, msg) ;
* ... take corrective action here ...
* }
*
* Error handling is simplified by the @sphinxref{LAGRAPH_TRY} / LAGRAPH_CATCH
* mechanism described below. For example, assuming the user application
* #defines a single LAGRAPH_CATCH mechanism for all error handling, the
* above example would become:
*
* GrB_Vector level, parent ;
* char msg [LAGRAPH_MSG_LEN] ;
* #define LAGRAPH_CATCH(status) \
* { \
* printf ("status %d, error: %s\n", status, msg) ; \
* ... take corrective action here ... \
* }
* ...
* LAGRAPH_TRY (LAGr_BreadthFirstSearch (&level, &parent, G, src, msg)) ;
*
* The advantage of the second use case is that the error-handling block of
* code needs to be written only once.
*/
#define LAGRAPH_MSG_LEN 256
//------------------------------------------------------------------------------
// LAGRAPH_TRY: try an LAGraph method and check for errors
//------------------------------------------------------------------------------
/** LAGRAPH_TRY: try an LAGraph method and check for errors.
*
* In a robust application, the return values from each call to LAGraph and
* GraphBLAS should be checked, and corrective action should be taken if an
* error occurs. The LAGRAPH_TRY and @sphinxref{GRB_TRY} macros assist in this
* effort.
*
* LAGraph and GraphBLAS are written in C, and so they cannot rely on the
* try/catch mechanism of C++. To accomplish a similar goal, each LAGraph file
* must `#define` its own file-specific macro called LAGRAPH_CATCH. The typical
* usage of macro is to free any temporary matrices/vectors or workspace when
* an error occurs, and then "throw" the error by returning to the caller. A
* user application may also `#define LAGRAPH_CATCH` and use these macros.
* The LAGRAPH_CATCH macro takes a single argument, which is the return value
* from an LAGraph method.
*
* A typical example of a user function that calls LAGraph might #define
* LAGRAPH_CATCH as follows. Suppose workvector is a GrB_vector used for
* computations internal to the mybfs function, and W is a (double *) space
* created by malloc.
*
* // an example user-defined LAGRAPH_CATCH macro, which prints the error
* // then frees any workspace or results, and returns to the caller:
* #define LAGRAPH_CATCH(status) \
* { \
* printf ("LAGraph error: (%d): file: %s, line: %d\n%s\n", \
* status, __FILE__, __LINE__, msg) ; \
* GrB_free (*parent) ; \
* GrB_free (workvector) ; \
* LAGraph_Free ((void **) &W, NULL) ; \
* return (status) ; \
* }
*
* // an example user function that uses LAGRAPH_TRY / LAGRAPH_CATCH
* int mybfs (LAGraph_Graph G, GrB_Vector *parent, int64_t src)
* {
* GrB_Vector workvector = NULL ;
* double *W = NULL ;
* char msg [LAGRAPH_MSG_LEN] ;
* (*parent) = NULL ;
* LAGRAPH_TRY (LAGr_BreadthFirstSearch (NULL, parent, G, src, true,
* msg)) ;
* // ...
* return (GrB_SUCCESS) ;
* }
*
* LAGRAPH_TRY is defined as follows:
*
* #define LAGRAPH_TRY(LAGraph_method) \
* { \
* int LG_status = LAGraph_method ; \
* if (LG_status < GrB_SUCCESS) \
* { \
* LAGRAPH_CATCH (LG_status) ; \
* } \
* }
*/
#define LAGRAPH_TRY(LAGraph_method) \
{ \
int LG_status = LAGraph_method ; \
if (LG_status < GrB_SUCCESS) \
{ \
LAGRAPH_CATCH (LG_status) ; \
} \
}
//------------------------------------------------------------------------------
// GRB_TRY: try a GraphBLAS method and check for errors
//------------------------------------------------------------------------------
/** GRB_TRY: LAGraph provides a similar functionality as @sphinxref{LAGRAPH_TRY}
* for calling GraphBLAS methods, with the GRB_TRY macro. GraphBLAS returns info
* = 0 (GrB_SUCCESS) or 1 (GrB_NO_VALUE) on success, and a value < 0 on failure.
* The user application must `#define GRB_CATCH` to use GRB_TRY.
*
* GraphBLAS and LAGraph both use the convention that negative values are
* errors, and the LAGraph_status is a superset of the GrB_Info enum. As a
* result, the user can define LAGRAPH_CATCH and GRB_CATCH as the same
* operation. The main difference between the two would be the error message
* string. For LAGraph, the string is the last parameter, and LAGRAPH_CATCH
* can optionally print it out. For GraphBLAS, the GrB_error mechanism can
* return a string.
*
* GRB_TRY is defined as follows:
*
* #define GRB_TRY(GrB_method) \
* { \
* GrB_Info LG_GrB_Info = GrB_method ; \
* if (LG_GrB_Info < GrB_SUCCESS) \
* { \
* GRB_CATCH (LG_GrB_Info) ; \
* } \
* }
*
*/
#define GRB_TRY(GrB_method) \
{ \
GrB_Info LG_GrB_Info = GrB_method ; \
if (LG_GrB_Info < GrB_SUCCESS) \
{ \
GRB_CATCH (LG_GrB_Info) ; \
} \
}
//==============================================================================
// for C++ applications:
//==============================================================================
#if defined ( __cplusplus )
extern "C"
{
#endif
//==============================================================================
// LAGraph memory management
//==============================================================================
// LAGraph provides wrappers for the malloc/calloc/realloc/free set of memory
// management functions, initialized by LAGraph_Init or LAGr_Init. By default,
// the following are pointers to the ANSI C11 malloc/calloc/realloc/free
// functions.
LAGRAPH_PUBLIC extern void * (* LAGraph_Malloc_function ) (size_t) ;
LAGRAPH_PUBLIC extern void * (* LAGraph_Calloc_function ) (size_t, size_t) ;
LAGRAPH_PUBLIC extern void * (* LAGraph_Realloc_function ) (void *, size_t) ;
LAGRAPH_PUBLIC extern void (* LAGraph_Free_function ) (void *) ;
//------------------------------------------------------------------------------
// LAGraph_Malloc: allocate a block of memory (wrapper for malloc)
//------------------------------------------------------------------------------
/** LAGraph_Malloc: allocates a block of memory. Uses the ANSI C11 malloc
* function if LAGraph_Init was used, or the user_malloc_function passed to
* LAGr_Init.
*
* @param[out] p handle to allocated memory.
* @param[in] nitems number of items to allocate, each of size size_of_item.
* @param[in] size_of_item bytes allocted = nitems*size_of_item.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_OUT_OF_MEMORY if out of memory.
* @retval GrB_NULL_POINTER if p is NULL on input.
*/
LAGRAPH_PUBLIC
int LAGraph_Malloc
(
// output:
void **p, // pointer to allocated block of memory
// input:
size_t nitems, // number of items
size_t size_of_item, // size of each item
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Calloc: allocate a block of memory (wrapper for calloc)
//------------------------------------------------------------------------------
/** LAGraph_Calloc: allocates a block of memory and sets it to zero. Uses the
* ANSI C11 malloc and memset functions if LAGraph_Init was used or if NULL
* was passed to LAGr_Init for the user_calloc_function, or the non-NULL
* user_calloc_function passed to LAGr_Init otherwise.
*
* @param[out] p handle to allocated memory.
* @param[in] nitems number of items to allocate, each of size size_of_item.
* @param[in] size_of_item bytes allocted = nitems*size_of_item.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_OUT_OF_MEMORY if out of memory.
* @retval GrB_NULL_POINTER if p is NULL on input.
*/
LAGRAPH_PUBLIC
int LAGraph_Calloc
(
// output:
void **p, // pointer to allocated block of memory
// input:
size_t nitems, // number of items
size_t size_of_item, // size of each item
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Realloc: reallocate a block of memory (wrapper for realloc)
//------------------------------------------------------------------------------
/** LAGraph_Realloc: reallocates a block of memory. Uses the ANSI C11 malloc,
* memcpy, and free functions if LAGraph_Init was used or if NULL was passed to
* LAGr_Init for the user_realloc_function, or the non-NULL
* user_realloc_function passed to LAGr_Init otherwise. Note that unlike the
* ANSI C11 realloc function, this function requires the old size of block to
* be provided on input (nitems_old). This size must be exact; behavior is
* undefined if the incorrect size is given. The value nitems_old*size_of_item
* must be the same as nitems*size_of_item when the block of memory was
* allocated by LAGraph_Malloc or LAGraph_Calloc, or equal to
* nitems_new*size_of_item from the last call to LAGraph_Realloc.
*
* @param[in,out] p handle to allocated memory.
* @param[in] nitems_new new number of items to allocate.
* @param[in] nitems_old prior number of items allocated.
* @param[in] size_of_item size of each item.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_OUT_OF_MEMORY if out of memory.
* @retval GrB_NULL_POINTER if p is NULL on input.
*/
LAGRAPH_PUBLIC
int LAGraph_Realloc
(
// input/output:
void **p, // old block to reallocate
// input:
size_t nitems_new, // new number of items in the object
size_t nitems_old, // old number of items in the object
size_t size_of_item, // size of each item
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Free: free a block of memory (wrapper for free)
//------------------------------------------------------------------------------
/** LAGraph_Free: frees a block of memory. The block must have been previously
* allocated by LAGraph_Malloc or LAGraph_Calloc. If LAGraph_Malloc (&p, ...)
* is the pointer to the allocated block of memory, LAGraph_Free (&p, ...) is
* the method to free it. The parameter is passed as &p so that p can be set
* to NULL on return, to guard against double-free. LAGraph_Free does nothing
* if &p or p are NULL on input; this is not an error.
*
* @param[in,out] p handle to allocated memory.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS in all cases.
*/
LAGRAPH_PUBLIC
int LAGraph_Free // free a block of memory and set p to NULL
(
// input/output:
void **p, // pointer to object to free, does nothing if NULL
char *msg
) ;
//==============================================================================
// LAGraph data structures
//==============================================================================
// In addition to relying on underlying GraphBLAS objects (GrB_Matrix,
// GrB_Vector, GrB_Descriptor, ...), LAGraph adds the LAGraph_Graph. This
// object contains a representation of a graph and its associated data. Unlike
// the GrB_* objects, the LAGraph_Graph is not opaque.
// LAGRAPH_UNKNOWN is used for all scalars whose value is not known
#define LAGRAPH_UNKNOWN (-1)
//------------------------------------------------------------------------------
// LAGraph_Kind: the kind of a graph
//------------------------------------------------------------------------------
/** LAGraph_Kind: the kind of a graph. Currently, only two types of graphs are
* supported: undirected graphs and directed graphs. Edge weights are assumed
* to be present. Unweighted graphs can be represented by setting all entries
* present in the sparsity structure to the same value, typically 1.
* Additional types of graphs will be added in the future.
*/
typedef enum
{
LAGraph_ADJACENCY_UNDIRECTED = 0, ///< undirected graph.
///< G->A is square and symmetric; both upper and lower triangular parts
///< are present. A(i,j) is the edge (i,j). Results are undefined if
///< A is unsymmetric.
LAGraph_ADJACENCY_DIRECTED = 1, ///< directed graph.
///< G->A is square; A(i,j) is the edge (i,j).
// possible future kinds of graphs:
// LAGraph_ADJACENCY_UNDIRECTED_UNWEIGHTED
// LAGraph_ADJACENCY_DIRECTED_UNWEIGHTED
// LAGraph_ADJACENCY_UNDIRECTED_TRIL
// LAGraph_ADJACENCY_UNDIRECTED_TRIU
// LAGraph_BIPARTITE
// LAGraph_BIPARTITE_DIRECTED
// LAGraph_BIPARTITE_UNDIRECTED
// LAGraph_INCIDENCE_*
// LAGraph_MULTIGRAPH_*
// LAGraph_HYPERGRAPH
// LAGraph_HYPERGRAPH_DIRECTED
// ...
LAGraph_KIND_UNKNOWN = LAGRAPH_UNKNOWN ///< unknown kind of graph (-1).
}
LAGraph_Kind ;
//------------------------------------------------------------------------------
// LAGraph_Boolean: true, false, or unknown
//------------------------------------------------------------------------------
/** LAGraph_Boolean: a boolean value (true or false) or unknown (-1).
*/
typedef enum
{
LAGraph_FALSE = 0, ///< the Boolean value is known to be false.
LAGraph_TRUE = 1, ///< the Boolean value is known to be true.
LAGraph_BOOLEAN_UNKNOWN = LAGRAPH_UNKNOWN ///< Boolean value is unknown.
}
LAGraph_Boolean ;
//------------------------------------------------------------------------------
// LAGraph_State: value, bound, or unknown
//------------------------------------------------------------------------------
/** LAGraph_State describes the status of a cached property of a graph. If the
* cached property is computed in floating-point arithmetic, it may have been
* computed with roundoff error, but it may still be declared as "value" if the
* roundoff error is expected to be small, or if the cached property was
* computed as carefully as possible (to within reasonable roundoff error).
* The "bound" state indicates that the cached property is an upper or lower
* bound, depending on the particular cached property. If computed in
* floating-point arithmetic, an "upper bound" cached property may be actually
* slightly lower than the actual upper bound, because of floating-point
* roundoff.
*/
typedef enum
{
LAGraph_VALUE = 0, ///< cached property is a known value.
LAGraph_BOUND = 1, ///< cached property is a bound.
///< The bound is upper or lower, depending on the particular cached
///< property.
LAGraph_STATE_UNKNOWN = LAGRAPH_UNKNOWN, ///< the property is unknown.
}
LAGraph_State ;
//------------------------------------------------------------------------------
// LAGraph_Graph: the primary graph data structure of LAGraph
//------------------------------------------------------------------------------
/** LAGraph_Graph: a representation of a graph.
*
* The LAGraph_Graph G contains a GrB_Matrix G->A as its primary component.
* For graphs represented with adjacency matrices, A(i,j) denotes the edge
* (i,j). Unlike GrB_* objects in GraphBLAS, the LAGraph_Graph data structure
* is not opaque. User applications have full access to its contents.
*
* An LAGraph_Graph G contains two kinds of components:
* 1. Primary components of the graph, which fully define the graph.
* 2. Cached properties of the graph, which can be recreated any time.
*/
// (1) primary components:
// A the adjacency matrix of the graph
// kind the kind of graph (undirected, directed, bipartite, ...)
// (2) cached properties:
// AT AT = A'
// out_degree out_degree(i) = # of entries in A(i,:)
// in_degree in_degree(j) = # of entries in A(:,j)
// is_symmetric_structure: true if the structure of A is symmetric
// nself_edges the number of entries on the diagonal of A
// emin minimum edge weight
// emax maximum edge weight
struct LAGraph_Graph_struct
{
//--------------------------------------------------------------------------
// primary components of the graph
//--------------------------------------------------------------------------
/** @name Primary Components */
//@{
GrB_Matrix A ; ///< the adjacency matrix of the graph
LAGraph_Kind kind ; ///< the kind of graph
//@}
// possible future components:
// multigraph ..
// GrB_Matrix *Amult ; // array of size nmatrices
// int nmatrices ;
// GrB_Vector NodeWeights ;
//--------------------------------------------------------------------------
// cached properties of the graph
//--------------------------------------------------------------------------
/** @name Cached Properties
*
* All of these components may be deleted or set to 'unknown' at any time.
* For example, if AT is NULL, then the transpose of A has not been
* computed. A scalar cached property of type LAGraph_Boolean would be set
* to LAGRAPH_UNKNOWN to denote that its value is unknown.
*
* If present, the cached properties must be valid and accurate. If the
* graph changes, these cached properties can either be recomputed or
* deleted to denote the fact that they are unknown. This choice is up to
* individual LAGraph methods and utilities.
*
* LAGraph methods can set non-scalar cached properties only if they are
* constructing the graph. They cannot modify them or create them if the
* graph is declared as a read-only object in the parameter list of the
* method.
*/
//@{
GrB_Matrix AT ; ///< AT = A', the transpose of A, with the same type.
GrB_Vector out_degree ; ///< a GrB_INT64 vector of length m, if A is m-by-n.
///< where out_degree(i) is the number of entries in A(i,:). If
///< out_degree is sparse and the entry out_degree(i) is not present,
///< then it is assumed to be zero.
GrB_Vector in_degree ; ///< a GrB_INT64 vector of length n, if A is m-by-n.
///< where in_degree(j) is the number of entries in A(:,j). If
///< in_degree is sparse and the entry in_degree(j) is not present,
///< then it is assumed to be zero. If A is known to have a
///< symmetric structure, the convention is that the degree is held
///< in G->out_degree, and in G->in_degree is left as NULL.
// FUTURE: If G is held as an incidence matrix, then G->A might be
// rectangular, in the future, but the graph G may have a symmetric
// structure anyway.
LAGraph_Boolean is_symmetric_structure ; ///< For an undirected
///< graph, this cached property will always be implicitly true and
///< can be ignored. The matrix A for a directed weighted graph
///< will typically be unsymmetric, but might have a symmetric
///< structure. In that case, this scalar cached property can be
///< set to true. By default, this cached property is set to
///< LAGRAPH_UNKNOWN.
int64_t nself_edges ; ///< number of entries on the diagonal of A, or
///< LAGRAPH_UNKNOWN if unknown. For the adjacency matrix of a
///< directed or undirected graph, this is the number of self-edges
///< in the graph.
GrB_Scalar emin ; ///< minimum edge weight: value, lower bound, or unknown
LAGraph_State emin_state ;
///< - VALUE: emin is equal to the smallest entry, min(G->A)
///< - BOUND: emin <= min(G->A)
///< - UNKNOWN: emin is unknown
GrB_Scalar emax ; ///< maximum edge weight: value, upper bound, or unknown
LAGraph_State emax_state ;
///< - VALUE: emax is equal to the largest entry, max(G->A)
///< - BOUND: emax >= max(G->A)
///< - UNKNOWN: emax is unknown
//@}
// FUTURE: possible future cached properties:
// Some algorithms may want to know if the graph has any edge weights
// exactly equal to zero. In some cases, this can be inferred from the
// emin/emax bounds, or it can be indicated via the following cached
// property:
// LAGraph_Boolean nonzero ; // If true, then all entries in
// G->A are known to be nonzero. If false, G->A may contain
// entries in its structure that are identically equal to zero. If
// unknown, then G->A may or may not have entries equal to zero.
// other edge weight metrics: median, standard deviation.... Might be
// useful for computing Delta for a Basic SSSP.
// GrB_Vector row_sum, col_sum ;
// row_sum(i) = sum(abs(A(i,:))), regardless of kind
// col_sum(j) = sum(abs(A(:,j))), regardless of kind
// LAGraph_Boolean connected ; // true if G is a connected graph
} ;
typedef struct LAGraph_Graph_struct *LAGraph_Graph ;
//==============================================================================
// LAGraph utilities
//==============================================================================
//------------------------------------------------------------------------------
// LAGraph_Init: start GraphBLAS and LAGraph
//------------------------------------------------------------------------------
/** LAGraph_Init: initializes GraphBLAS and LAGraph. This method must be
* called before calling any other GrB* or LAGraph* method. It initializes
* GraphBLAS with GrB_init and then performs LAGraph-specific initializations.
* In particular, the LAGraph semirings listed below are created. GrB_init can
* also safely be called before calling @sphinxref{LAGr_Init} or LAGraph_Init.
*
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_INVALID_VALUE if LAGraph_Init or LAGr_Init has already been
* called by the user application.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Init
(
char *msg
) ;
// FUTURE: include these as built-in semirings in v2.1 C API, Table 3.9:
// LAGraph semirings, created by LAGraph_Init or LAGr_Init:
LAGRAPH_PUBLIC extern GrB_Semiring
// LAGraph_plus_first_T: using the GrB_PLUS_MONOID_T monoid and the
// corresponding GrB_FIRST_T multiplicative operator.
LAGraph_plus_first_int8 ,
LAGraph_plus_first_int16 ,
LAGraph_plus_first_int32 ,
LAGraph_plus_first_int64 ,
LAGraph_plus_first_uint8 ,
LAGraph_plus_first_uint16 ,
LAGraph_plus_first_uint32 ,
LAGraph_plus_first_uint64 ,
LAGraph_plus_first_fp32 ,
LAGraph_plus_first_fp64 ,
// LAGraph_plus_second_T: using the GrB_PLUS_MONOID_T monoid and the
// corresponding GrB_SECOND_T multiplicative operator.
LAGraph_plus_second_int8 ,
LAGraph_plus_second_int16 ,
LAGraph_plus_second_int32 ,
LAGraph_plus_second_int64 ,
LAGraph_plus_second_uint8 ,
LAGraph_plus_second_uint16 ,
LAGraph_plus_second_uint32 ,
LAGraph_plus_second_uint64 ,
LAGraph_plus_second_fp32 ,
LAGraph_plus_second_fp64 ,
// LAGraph_plus_one_T: using the GrB_PLUS_MONOID_T monoid and the
// corresponding GrB_ONEB_T multiplicative operator.
LAGraph_plus_one_int8 ,
LAGraph_plus_one_int16 ,
LAGraph_plus_one_int32 ,
LAGraph_plus_one_int64 ,
LAGraph_plus_one_uint8 ,
LAGraph_plus_one_uint16 ,
LAGraph_plus_one_uint32 ,
LAGraph_plus_one_uint64 ,
LAGraph_plus_one_fp32 ,
LAGraph_plus_one_fp64 ,
// LAGraph_any_one_T: using the GrB_MIN_MONOID_T for non-boolean types or
// GrB_LOR_MONOID_BOOL for boolean, and the GrB_ONEB_T multiplicative op.
// These semirings are very useful for unweighted graphs, or for algorithms
// that operate only on the sparsity structure of unweighted graphs.
LAGraph_any_one_bool , // (or, true) semiring
LAGraph_any_one_int8 , // (min, 1) semiring
LAGraph_any_one_int16 ,
LAGraph_any_one_int32 ,
LAGraph_any_one_int64 ,
LAGraph_any_one_uint8 ,
LAGraph_any_one_uint16 ,
LAGraph_any_one_uint32 ,
LAGraph_any_one_uint64 ,
LAGraph_any_one_fp32 ,
LAGraph_any_one_fp64 ;
//------------------------------------------------------------------------------
// LAGraph_Version: determine the version of LAGraph
//------------------------------------------------------------------------------
/** LAGraph_Version: determines the version of LAGraph. The version number and
* date can also be obtained via compile-time constants from LAGraph.h.
* However, it is possible to compile a user application that #includes one
* version of LAGraph.h and then links with another version of the LAGraph
* library later on, so the version number and date may differ from the
* compile-time constants.
*
* The LAGraph_Version method allows the library itself to be queried, after it
* is linked in with the user application.
*
* The version_number array is set to LAGRAPH_VERSION_MAJOR,
* LAGRAPH_VERSION_MINOR, and LAGRAPH_VERSION_UPDATE, in that order. The
* LAGRAPH_DATE string is copied into the user-provided version_date string,
* and is null-terminated.
*
* @param[out] version_number an array of size 3; with the major, minor,
* and update versions of LAGraph, in that order.
* @param[out] version_date an array of size >= LAGraph_MSG_LEN, returned
* with the date of this version of LAGraph.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if version_number or version_date are NULL.
*/
LAGRAPH_PUBLIC
int LAGraph_Version
(
// output:
int version_number [3], // user-provided array of size 3
char *version_date, // user-provided array of size >= LAGRAPH_MSG_LEN
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Finalize: finish LAGraph
//------------------------------------------------------------------------------
/** LAGraph_Finalize: finish LAGraph and GraphBLAS. Must be called as the last
* LAGraph method. It calls GrB_finalize and frees any LAGraph objects created
* by @sphinxref{LAGraph_Init} or @sphinxref{LAGr_Init}. After calling this
* method, no LAGraph or GraphBLAS methods may be used.
*
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Finalize
(
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_New: create a new graph
//------------------------------------------------------------------------------
/** LAGraph_New: creates a new graph G. The cached properties G->AT,
* G->out_degree, and G->in_degree are set to NULL, and scalar cached
* properties are set to LAGRAPH_UNKNOWN.
*
* @param[out] G handle to the newly created graph, as &G.
* @param[in,out] A adjacency matrix. A is moved into G as G->A, and A
* itself is set to NULL to denote that is now a part of
* G. That is, { G->A = A ; A = NULL ; } is performed.
* When G is deleted, G->A is freed. If A is NULL, the
* graph is invalid until G->A is set.
* @param[in] kind the kind of graph to create. This may be
* LAGRAPH_UNKNOWN, which must then be revised later
* before the graph can be used.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if G is null.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_New
(
// output:
LAGraph_Graph *G, // the graph to create, NULL if failure
// input/output:
GrB_Matrix *A, // the adjacency matrix of the graph, may be NULL.
// input:
LAGraph_Kind kind, // the kind of graph.
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Delete: free a graph and all its contents
//------------------------------------------------------------------------------
/** LAGraph_Delete: frees a graph G. The adjacency matrix G->A and the cached
* properties G->AT, G->out_degree, and G->in_degree are all freed.
*
* @param[in,out] G handle to the graph to be free. *G is NULL on output.
* To keep G->A while deleting the graph G, use:
* { A = G->A ; G->A = NULL ; LAGraph_Delete (&G, msg) ; }
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Delete
(
// input/output:
LAGraph_Graph *G, // the graph to delete; G set to NULL on output.
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_DeleteCached: free any internal cached properties of a graph
//------------------------------------------------------------------------------
/** LAGraph_DeleteCached: frees all cached properies of a graph G. The graph is
* still valid. This method should be used if G->A changes, since such changes
* will normally invalidate G->AT, G->out_degree, and/or G->in_degree.
*
* @param[in,out] G handle to the graph to modified. The graph G remains
* valid on output, but with all cached properties freed.
* G may be NULL, in which case nothing is done.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_DeleteCached
(
// input/output:
LAGraph_Graph G, // G stays valid, only cached properties are freed
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Cached_AT: construct G->AT for a graph
//------------------------------------------------------------------------------
/** LAGraph_Cached_AT: constructs G->AT, the transpose of G->A. This matrix is
* required by some of the algorithms. Basic algorithms may construct G->AT if
* they require it. The matrix G->AT is then available for subsequent use. If
* G->A changes, G->AT should be freed and recomputed. If G->AT already
* exists, it is left unchanged (even if it is not equal to the transpose of
* G->A). As a result, if G->A changes, G->AT should be explictly freed.
*
* @param[in,out] G graph for which G->AT is computed.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if G is NULL.
* @retval LAGRAPH_CACHE_NOT_NEEDED if G->kind is LAGraph_ADJACENCY_UNDIRECTED.
* @retval LAGRAPH_INVALID_GRAPH if G is invalid (G->A missing, or G->kind
* not a recognized kind).
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Cached_AT
(
// input/output:
LAGraph_Graph G, // graph for which to compute G->AT
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Cached_IsSymmetricStructure: determine G->is_symmetric_structure
//------------------------------------------------------------------------------
/** LAGraph_Cached_IsSymmetricStructure: determines if the sparsity structure of
* G->A is symmetric (ignoring its values). If G->kind denotes that the graph
* is undirected, this cached property is implicitly true (and not checked).
* Otherwise, this method determines if the structure of G->A for a directed
* graph G has a symmetric sparsity structure. No work is performed if the
* cached property is already known.
*
* @param[in,out] G graph for which G->is_symmetric_structure is computed.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if G is NULL.
* @retval LAGRAPH_INVALID_GRAPH if G is invalid (G->A missing, or G->kind
* not a recognized kind).
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Cached_IsSymmetricStructure
(
// input/output:
LAGraph_Graph G, // graph to determine the symmetry of structure of A
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Cached_OutDegree: determine G->out_degree
//------------------------------------------------------------------------------
/** LAGraph_Cached_OutDegree: computes G->out_degree. No work is performed if
* it already exists in G.
*
* @param[in,out] G graph for which G->out_degree is computed.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if G is NULL.
* @retval LAGRAPH_INVALID_GRAPH if G is invalid (G->A missing, or G->kind
* not a recognized kind).
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Cached_OutDegree
(
// input/output:
LAGraph_Graph G, // graph to determine G->out_degree
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Cached_InDegree: determine G->in_degree
//------------------------------------------------------------------------------
/** LAGraph_Cached_InDegree computes G->in_degree. No work is performed if it
* already exists in G. If G is undirected, G->in_degree is never computed and
* remains NULL (the method returns LAGRAPH_CACHE_NOT_NEEDED). No work is
* performed if it is already exists in G.
*
* Performance note: for SuiteSparse:GraphBLAS, if G->A is held by row (the
* default format), then computing G->in_degree is fastest if G->AT is known.
* If G->AT will be needed anyway, compute it first with LAGraph_Cached_AT, and
* then call LAGraph_Cached_Indegree. This is optional; if G->AT is not known,
* then G->in_degree is computed from G->A instead.
*
* @param[in,out] G graph for which G->in_degree is computed.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if G is NULL.
* @retval LAGRAPH_CACHE_NOT_NEEDED if G->kind is LAGraph_ADJACENCY_UNDIRECTED.
* @retval LAGRAPH_INVALID_GRAPH if G is invalid (G->A missing, or G->kind
* not a recognized kind).
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Cached_InDegree
(
// input/output:
LAGraph_Graph G, // graph to determine G->in_degree
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Cached_NSelfEdges: determine G->nself_edges
//------------------------------------------------------------------------------
/** LAGraph_Cached_NSelfEdges: computes G->nself_edges, the number of diagonal
* entries that appear in the G->A matrix. For an undirected or directed graph
* with an adjacency matrix G->A, these are the number of self-edges in G. No
* work is performed it is already computed.
*
* @param[in,out] G graph for which G->nself_edges is computed.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if G is NULL.
* @retval LAGRAPH_INVALID_GRAPH if G is invalid (G->A missing, or G->kind
* not a recognized kind).
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Cached_NSelfEdges
(
// input/output:
LAGraph_Graph G, // graph to compute G->nself_edges
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Cached_EMin: determine G->emin
//------------------------------------------------------------------------------
/** LAGraph_Cached_EMin: computes the G->emin, the smallest entry in G->A.
* Not computed if G->emin already exists.
*
* @param[in,out] G graph for which G->emin is computed.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NOT_IMPLEMENTED if G does not have a built-in real type:
* GrB_(BOOL, INT8, INT16, INT32, INT64, UINT8, UINT16, UINT32, UINT64,
* FP32, OR FP64).
* @retval GrB_NULL_POINTER if G is NULL.
* @retval LAGRAPH_INVALID_GRAPH if G is invalid (G->A missing, or G->kind
* not a recognized kind).
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Cached_EMin
(
// input/output:
LAGraph_Graph G, // graph to determine G->emin
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Cached_EMax: determine G->emax
//------------------------------------------------------------------------------
/** LAGraph_Cached_EMax: computes the G->emax, the largest entry in G->A.
* Not computed if G->emax already exists.
*
* @param[in,out] G graph for which G->emax is computed.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NOT_IMPLEMENTED if G does not have a built-in real type:
* GrB_(BOOL, INT8, INT16, INT32, INT64, UINT8, UINT16, UINT32, UINT64,
* FP32, OR FP64).
* @retval GrB_NULL_POINTER if G is NULL.
* @retval LAGRAPH_INVALID_GRAPH if G is invalid (G->A missing, or G->kind
* not a recognized kind).
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Cached_EMax
(
// input/output:
LAGraph_Graph G, // graph to determine G->emax
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_DeleteSelfEdges: remove all diagonal entries from G->A
//------------------------------------------------------------------------------
/** LAGraph_DeleteSelfEdges: removes any diagonal entries from G->A. Most
* cached properties are cleared or set to LAGRAPH_UNKNOWN. G->nself_edges is
* set to zero, and G->is_symmetric_structure is left unchanged.
*
* @param[in,out] G graph for which G->A is modified.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if G is NULL.
* @retval LAGRAPH_INVALID_GRAPH if G is invalid (G->A missing, or G->kind
* not a recognized kind).
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_DeleteSelfEdges
(
// input/output:
LAGraph_Graph G, // diagonal entries removed, most cached properties
// cleared
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_CheckGraph: determine if a graph is valid
//------------------------------------------------------------------------------
/** LAGraph_CheckGraph: determines if a graph is valid. Only basic checks are
* performed on the cached properties, taking O(1) time.
*
* @param[in] G graph to check.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if G is NULL.
* @retval LAGRAPH_INVALID_GRAPH if G is invalid: G->A missing, G->kind
* not a recognized kind, G->AT present but has the wrong dimensions or
* its type does not match G->A, G->in_degree/out_degree present but
* with the wrong dimension or type (in/out_degree must be GrB_INT64).
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_CheckGraph
(
// input/output:
LAGraph_Graph G, // graph to check
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_GetNumThreads: determine # of OpenMP threads to use
//------------------------------------------------------------------------------
/** LAGraph_GetNumThreads determines the current number of OpenMP threads that
* can be used. See LAGraph_SetNumThreads for a description of nthreads_outer
* and nthreads_inner.
*
* @param[out] nthreads_outer number of threads for outer region.
* @param[out] nthreads_inner number of threads for inner region,
* or for the underlying GraphBLAS library.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if nthreads_outer or nthreads_inner are NULL.
*/
LAGRAPH_PUBLIC
int LAGraph_GetNumThreads
(
// output:
int *nthreads_outer, // for outer region for nested parallelism
int *nthreads_inner, // for inner region of nested parallelism, or for
// the underlying GraphBLAS library
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_SetNumThreads: set # of OpenMP threads to use
//------------------------------------------------------------------------------
/** LAGraph_SetNumThreads sets the current number of OpenMP threads that can be
* used by LAGraph and GraphBLAS. Two thread counts can be controlled:
*
* @param[in] nthreads_outer
* number of threads to be used in outer regions of a
* nested parallel construct assuming that nthreads_inner is used in the
* inner region. The total number of threads used for an entire nested
* region in LAGraph is given by nthreads_outer*nthreads_inner. This
* product is also the # of threads that a flat parallel region in LAGraph
* may use.
* @param[in] nthreads_inner
* number of threads to be used in an inner region of a
* nested parallel construct, or for the # of threads to be used in each
* call to the underlying GraphBLAS library.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_SetNumThreads
(
// input:
int nthreads_outer,
int nthreads_inner,
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_WallClockTime: return the current wall clock time
//------------------------------------------------------------------------------
/** LAGraph_WallClockTime returns the current wall clock time. Normally, this
* is simply a wrapper for omp_get_wtime, if OpenMP is in use. Otherwise, an
* OS-specific timing function is called. Note that unlike all other LAGraph
* functions, this function does not return an error condition, nor does it
* have a msg string parameter. Instead, it returns the current wall clock
* time (in seconds) since some fixed point in the past.
*
* @returns the current wall clock time.
*/
LAGRAPH_PUBLIC
double LAGraph_WallClockTime // returns omp_get_wtime(), or other timer
(
void
) ;
//------------------------------------------------------------------------------
// LAGraph_MMRead: read a matrix in MatrixMarket format
//------------------------------------------------------------------------------
/** LAGraph_MMRead: reads a matrix in MatrixMarket format.
* The file format used here is compatible with all variations of the Matrix
* Market "coordinate" and "array" format (http://www.nist.gov/MatrixMarket),
* for sparse and dense matrices respectively. The format is fully described
* in <a href="https://github.com/GraphBLAS/LAGraph/blob/stable/papers/MatrixMarket.pdf">
* LAGraph/Doc/MatrixMarket.pdf</a>, and summarized here (with extensions for LAGraph).
*
* \rst_star{
* First Line
* ----------
*
* The first line of the file starts with ``%%MatrixMarket``, with the following
* format::
*
* %%MatrixMarket matrix <fmt> <type> <storage>
*
* <fmt>
* One of:
*
* - coordinate : sparse matrix in triplet form
* - array : dense matrix in column-major form
*
* Both formats are returned as a GrB_Matrix.
*
* If not present, defaults to coordinate.
*
* <type>
* One of:
*
* - real : returns as GrB_FP64
* - integer : returns as GrB_INT64
* - pattern : returns as GrB_BOOL
* - complex : *currently not supported*
*
* The return type can be modified by the ``%%GraphBLAS``
* structured comment described below.
*
* If not present, defaults to real.
*
* <storage>
* One of:
*
* - general
* the matrix has no symmetry properties (or at least none that
* were exploited when the file was created).
* - Hermitian
* square complex matrix with A(i,j) = conj (A(j,i)). All
* entries on the diagonal are real. Each off-diagonal entry in the file
* creates two entries in the GrB_Matrix that is returned.
* - symmetric
* A(i,j) == A(j,i). Only entries on or below the diagonal
* appear in the file. Each off-diagonal entry in the file creates two entries
* in the GrB_Matrix that is returned.
* - skew-symmetric
* A(i,j) == -A(i,j). There are no entries on the
* diagonal. Only entries below the diagonal appear in the file. Each
* off-diagonal entry in the file creates two entries in the GrB_Matrix that is
* returned.
*
* The Matrix Market format is case-insensitive, so "hermitian" and
* "Hermitian" are treated the same.
*
* If not present, defaults to general.
*
* Not all combinations are permitted. Only the following are meaningful:
*
* (1) (coordinate or array) x (real, integer, or complex) x (general, symmetric, or skew-symmetric)
* (2) (coordinate or array) x (complex) x (Hermitian)
* (3) (coodinate) x (pattern) x (general or symmetric)
*
* Second Line
* -----------
*
* The second line is an optional extension to the Matrix Market format::
*
* %%GraphBLAS type <entrytype>
*
* <entrytype>
* One of the 11 built-in types (bool, int8_t, int16_t,
* int32_t, int64_t, uint8_t, uint16_t, uint32_t, uint64_t, float, or
* double.
*
* If this second line is included, it overrides the default GraphBLAS
* types for the Matrix Market <type> on line one of the file: real,
* pattern, and integer. The Matrix Market complex <type> is not yet
* supported.
*
* Other Lines
* -----------
*
* Any other lines starting with "%" are treated as comments, and are ignored.
* Comments may be interspersed throughout the file. Blank lines are ignored.
* The Matrix Market header is optional in this routine (it is not optional in
* the Matrix Market format). The remaining lines are space delimited,
* and free format (one or more spaces can
* appear, and each field has arbitrary width).
*
* Coordinate Format
* -----------------
* For coordinate format, the first non-comment line must appear,
* and it must contain three integers::
*
* nrows ncols nvals
*
* For example, a 5-by-12 matrix with 42 entries would have::
*
* 5 12 42
*
* Each of the remaining lines defines one entry. The order is arbitrary. If
* the Matrix Market <type> is real or integer, each line contains three
* numbers: row index, column index, and value. For example, if A(3,4) is
* equal to 5.77, a line::
*
* 3 4 5.77
*
* would appear in the file. The indices in the Matrix Market are 1-based, so
* this entry becomes A(2,3) in the GrB_Matrix returned to the caller. If the
* <type> is pattern, then only the row and column index appears. If <type> is
* complex, four values appear. If A(8,4) has a real part of 6.2 and an
* imaginary part of -9.3, then the line is::
*
* 8 4 6.2 -9.3
*
* and since the file is 1-based but a GraphBLAS matrix is always 0-based, one
* is subtracted from the row and column indices in the file, so this entry
* becomes A(7,3). Note however that LAGraph does not yet support complex
* types.
*
* Array Format
* ------------
* For array format, the first non-comment line must appear, and it
* must contain just two integers::
*
* nrows ncols
*
* A 5-by-12 matrix would have this as the first non-comment line after the
* header::
*
* 5 12
*
* Each of the remaining lines defines one entry, in column major order. If
* the <type> is real or integer, this is the value of the entry. An entry if
* <type> of complex consists of two values, the real and imaginary part (not
* yet supported). The <type> cannot be pattern in this case.
*
* Infinity & Not-A-Number
* -----------------------
* For both coordinate and array formats, real and complex values may use the
* terms ``INF``, ``+INF``, ``-INF``, and ``NAN`` to represent floating-point
* infinity and NaN values, in either upper or lower case.
* }
*
* According to the Matrix Market format, entries are always listed in
* column-major order. This rule is follwed by @sphinxref{LAGraph_MMWrite}.
* However, LAGraph_MMRead can read the entries in any order.
*
* @param[out] A handle of the matrix to create.
* @param[in,out] f handle to an open file to read from.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if A or f are NULL.
* @retval LAGRAPH_IO_ERROR if the file could not
* be read or contains a matrix with an invalid Matrix Market format.
* @retval GrB_NOT_IMPLEMENTED if the type is not supported. Complex types
* (GxB_FC32 and GxB_FC64 in SuiteSparse:GraphBLAS) are not yet supported.
* @returns any GraphBLAS errors that may have been encountered.
*/
// FUTURE: add support for user-defined types. Perhaps LAGr_MMRead (...) with
// an extra parameter: pointer to function that reads a single UDT scalar
// from the file and returns the UDT scalar itself. Or LAGraph_MMRead_UDT.
LAGRAPH_PUBLIC
int LAGraph_MMRead
(
// output:
GrB_Matrix *A, // handle of matrix to create
// input:
FILE *f, // file to read from, already open
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_MMWrite: write a matrix in MatrixMarket format
//------------------------------------------------------------------------------
/** LAGraph_MMWrite: writes a matrix in MatrixMarket format. Refer to
* @sphinxref{LAGraph_MMRead} for a description of the output file format. The
* MatrixMarket header line always appears, followed by the second line
* containing the GraphBLAS type:
*
* %%GraphBLAS type <entrytype>
*
* @param[in] A matrix to write.
* @param[in,out] f handle to an open file to write to.
* @param[in] fcomments optional handle to an open file containing comments; may be NULL.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if A or f are NULL.
* @retval LAGRAPH_IO_ERROR if the file could not be written to.
* @retval GrB_NOT_IMPLEMENTED if the type is not supported. Complex types
* (GxB_FC32 and GxB_FC64 in SuiteSparse:GraphBLAS) are not yet supported.
* @returns any GraphBLAS errors that may have been encountered.
*/
// FUTURE: add support for user-defined types. Perhaps as LAGr_MMWrite, which
// has an extra parameter: a pointer to a function that takes a UDT scalar as
// input, and writes it to the file. Or call it LAGraph_MMWrite_UDT.
LAGRAPH_PUBLIC
int LAGraph_MMWrite
(
// input:
GrB_Matrix A, // matrix to write to the file
FILE *f, // file to write it to, must be already open
FILE *fcomments, // optional file with extra comments, may be NULL
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Matrix_Structure: return the structure of a matrix
//------------------------------------------------------------------------------
/** LAGraph_Matrix_Structure: returns the sparsity structure of a matrix A as a
* boolean (GrB_BOOL) matrix C. If A(i,j) appears in the sparsity structure of
* A, then C(i,j) is set to true. The sparsity structure of A and C are
* identical.
*
* @param[out] C A boolean matrix with same structure of A, with C(i,j)
* true if A(i,j) appears in the sparsity structure of A.
* @param[in] A matrix to compute the structure for.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if A or C are NULL.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Matrix_Structure
(
// output:
GrB_Matrix *C, // the structure of A
// input:
GrB_Matrix A,
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Vector_Structure: return the structure of a vector
//------------------------------------------------------------------------------
/** LAGraph_Vector_Structure: returns the sparsity structure of a vector u as a
* boolean (GrB_BOOL) vector w. If u(i) appears in the sparsity structure of
* u, then w(i) is set to true. The sparsity structure of u and w are
* identical.
*
* @param[out] w A boolean vector with same structure of u, with w(i)
* true if u(i,j) appears in the sparsity structure of u.
* @param[in] u vector to compute the structure for.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if w or u are NULL.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Vector_Structure
(
// output:
GrB_Vector *w, // the structure of u
// input:
GrB_Vector u,
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_NameOfType: return the name of a type
//------------------------------------------------------------------------------
/** LAGraph_NameOfType returns the name of a GraphBLAS type as a string. The
* names for the 11 built-in types (GrB_BOOL, GrB_INT8, etc) correspond to the
* names of the corresponding C types (bool, int8_t, etc).
*
* @param[out] name name of the type: user provided array of size at
* least LAGRAPH_MAX_NAME_LEN.
* @param[in] type GraphBLAS type to find the name of.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if name or type are NULL.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_NameOfType
(
// output:
char *name, // name of type: user array of size LAGRAPH_MAX_NAME_LEN
// input:
GrB_Type type, // GraphBLAS type
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_TypeFromName: return a GrB_Type from its name
//------------------------------------------------------------------------------
/** LAGraph_TypeFromName: returns the GrB_Type corresponding to its name. That
* is, given the string "bool", this method returns GrB_BOOL.
*
* @param[out] type GraphBLAS type corresponding to the given name string.
* @param[in] name name of the type: a null-terminated string.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if name or type are NULL.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_TypeFromName
(
// output:
GrB_Type *type, // GraphBLAS type
// input:
char *name, // name of the type: a null-terminated string
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_SizeOfType: return sizeof(...) of a GraphBLAS GrB_Type
//------------------------------------------------------------------------------
/** LAGraph_SizeOfType: returns sizeof(...) of a GraphBLAS GrB_Type. For
* example, if given the GrB_Type of GrB_FP64, the value sizeof(double) is
* returned.
*
* @param[out] size size of the type
* @param[in] type GraphBLAS type to find the size of.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if size or type are NULL.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_SizeOfType
(
// output:
size_t *size, // size of the type
// input:
GrB_Type type, // GraphBLAS type
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Matrix_TypeName: return the name of the GrB_Type of a GrB_Matrix
//------------------------------------------------------------------------------
/** LAGraph_Matrix_TypeName: returns the name of the GrB_Type of a GrB_Matrix.
*
* @param[out] name name of the type of the matrix: user provided array of
* size at least LAGRAPH_MAX_NAME_LEN.
* @param[in] A GraphBLAS matrix to find the type name of.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if name or A are NULL.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Matrix_TypeName
(
// output:
char *name, // name of the type of the matrix A (user-provided array
// of size at least LAGRAPH_MAX_NAME_LEN).
// input:
GrB_Matrix A, // matrix to query
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Vector_TypeName: return the name of the GrB_Type of a GrB_Vector
//------------------------------------------------------------------------------
/** LAGraph_Vector_TypeName: returns the name of the GrB_Type of a GrB_Vector.
*
* @param[out] name name of the type of the vector: user provided array of
* size at least LAGRAPH_MAX_NAME_LEN.
* @param[in] v GraphBLAS vector to find the type name of.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if name or v are NULL.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Vector_TypeName
(
// output:
char *name, // name of the type of the vector v (user-provided array
// of size at least LAGRAPH_MAX_NAME_LEN).
// input:
GrB_Vector v, // vector to query
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Scalar_TypeName: return the name of the GrB_Type of a GrB_Scalar
//------------------------------------------------------------------------------
/** LAGraph_Scalar_TypeName: returns the name of the GrB_Type of a GrB_Scalar.
*
* @param[out] name name of the type of the scalar: user provided array of
* size at least LAGRAPH_MAX_NAME_LEN.
* @param[in] s GraphBLAS scalar to find the type name of.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if name or s are NULL.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Scalar_TypeName
(
// output:
char *name, // name of the type of the scalar s (user-provided array
// of size at least LAGRAPH_MAX_NAME_LEN).
// input:
GrB_Scalar s, // scalar to query
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_PrintLevel: control printing in LAGraph_*_Print methods
//------------------------------------------------------------------------------
/** LAGraph_PrintLevel: an enum to control how much to print in
* LAGraph_*_Print methods.
*/
typedef enum
{
LAGraph_SILENT = 0, ///< nothing is printed.
LAGraph_SUMMARY = 1, ///< print a terse summary.
LAGraph_SHORT = 2, ///< short description, about 30 entries.
LAGraph_COMPLETE = 3, ///< print the entire contents of the object.
LAGraph_SHORT_VERBOSE = 4, ///< short, but with "%.15g" for doubles.
LAGraph_COMPLETE_VERBOSE = 5 ///< complete, but "%.15g" for doubles.
// FUTURE:
// LAGraph_SHORT_ARRAY ...
// LAGraph_COMPLETE_ARRAY ...
//
// . 3.3 . 9 .
// 99 32 . . .
//
// LAGraph_SHORT_STRUCTURE ...
// LAGraph_COMPLETE_STRUCTURE ...
//
// . x . x x x .
// x x . x x x .
// . x . x . x .
// . . . . x x .
// FUTURE: # of digits per entry? automatic digits per column?
}
LAGraph_PrintLevel ;
//------------------------------------------------------------------------------
// LAGraph_Graph_Print: print the contents of a graph
//------------------------------------------------------------------------------
/** LAGraph_Graph_Print: prints the contents of a graph to a file in a human-
* readable form. This method is not meant for saving a graph to a file; see
* @sphinxref{LAGraph_MMWrite} for that method.
*
* @param[in] G graph to display.
* @param[in] pr print level.
* @param[in,out] f handle to an open file to write to.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if G or f are NULL.
* @retval LAGRAPH_INVALID_GRAPH if G is invalid
* (@sphinxref{LAGraph_CheckGraph} failed).
* @retval GrB_NOT_IMPLEMENTED if G->A has a user-defined type.
* @retval LAGRAPH_IO_ERROR if the file could not be written to.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Graph_Print
(
// input:
const LAGraph_Graph G, // graph to display
LAGraph_PrintLevel pr, // print level (0 to 5)
FILE *f, // file to write to, must already be open
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Matrix_Print: pretty-print a matrix
//------------------------------------------------------------------------------
/** LAGraph_Matrix_Print displays a matrix in a human-readable form. This
* method is not meant for saving a GrB_Matrix to a file; see
* @sphinxref{LAGraph_MMWrite} for that method.
*
* @param[in] A matrix to display.
* @param[in] pr print level.
* @param[in,out] f handle to an open file to write to.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if A or f are NULL.
* @retval GrB_NOT_IMPLEMENTED if A has a user-defined type.
* @retval LAGRAPH_IO_ERROR if the file could not be written to.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Matrix_Print
(
// input:
const GrB_Matrix A, // matrix to pretty-print to the file
LAGraph_PrintLevel pr, // print level (0 to 5)
FILE *f, // file to write it to, must be already open; use
// stdout or stderr to print to those locations.
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Vector_Print: pretty-print a matrix
//------------------------------------------------------------------------------
/** LAGraph_Vector_Print displays a vector in a human-readable form. This
* method is not meant for saving a GrB_Vector to a file. To perform that
* operation, copy the GrB_Vector into an n-by-1 GrB_Matrix and use
* @sphinxref{LAGraph_MMWrite}.
*
* @param[in] v vector to display.
* @param[in] pr print level.
* @param[in,out] f handle to an open file to write to.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if v or f are NULL.
* @retval GrB_NOT_IMPLEMENTED if v has a user-defined type.
* @retval LAGRAPH_IO_ERROR if the file could not be written to.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Vector_Print
(
// input:
const GrB_Vector v, // vector to pretty-print to the file
LAGraph_PrintLevel pr, // print level (0 to 5)
FILE *f, // file to write it to, must be already open; use
// stdout or stderr to print to those locations.
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Matrix_IsEqual: compare for exact equality
//------------------------------------------------------------------------------
/** LAGraph_Matrix_IsEqual compares two matrices for exact equality. If the
* two matrices have different data types, the result is always false (no
* typecasting is performed). Only the 11 built-in GrB* types are supported.
* If both A and B are NULL, the return value is true. If A and/or B are
* floating-point types and contain NaN's, result is false.
*
* @param[out] result true if A and B are exactly equal, false otherwise.
* @param[in] A matrix to compare.
* @param[in] B matrix to compare.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if result is NULL.
* @retval GrB_NOT_IMPLEMENTED if A or B has a user-defined type.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Matrix_IsEqual
(
// output:
bool *result, // true if A == B, false if A != B or error
// input:
const GrB_Matrix A,
const GrB_Matrix B,
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Matrix_IsEqualOp: check if two matrices are equal with given op
//------------------------------------------------------------------------------
/** LAGraph_Matrix_IsEqualOp compares two matrices using the given binary
* operator. The op may be built-in or user-defined. The two matrices may
* have different types and still be determined to be equal. To be equal, two
* matrices must have the same sparsity structure, and op(aij,bij) must return
* true for all pairs of entries aij and bij that appear in the structure of
* both A and B. The matrices A and/or B can have any type, as long as they
* are valid inputs to the op. If both A and B are NULL, the return value is
* true.
*
* @param[out] result true if A and B are equal (per the op), false otherwise.
* @param[in] A matrix to compare.
* @param[in] B matrix to compare.
* @param[in] op operator for the comparison.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if result or op are NULL.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Matrix_IsEqualOp
(
// output:
bool *result, // true if A == B, false if A != B or error
// input:
const GrB_Matrix A,
const GrB_Matrix B,
const GrB_BinaryOp op, // comparator to use
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Vector_IsEqual: check if two vectors are equal
//------------------------------------------------------------------------------
/** LAGraph_Vector_IsEqual compares two vectors for exact equality. If the
* two vectors have different data types, the result is always false (no
* typecasting is performed). Only the 11 built-in GrB* types are supported.
* If both u and v are NULL, the return value is true. If u and/or v are
* floating-point types and contain NaN's, result is false.
*
* @param[out] result true if u and v are exactly equal, false otherwise.
* @param[in] u vector to compare.
* @param[in] v vector to compare.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if result is NULL.
* @retval GrB_NOT_IMPLEMENTED if u or v has a user-defined type.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Vector_IsEqual
(
// output:
bool *result, // true if A == B, false if A != B or error
// input:
const GrB_Vector u,
const GrB_Vector v,
char *msg
) ;
//------------------------------------------------------------------------------
// LAGraph_Vector_IsEqualOp: check if two vectors are equal with given op
//------------------------------------------------------------------------------
/** LAGraph_Vector_IsEqualOp compares two vectors using the given binary
* operator. The op may be built-in or user-defined. The two vectors may
* have different types and still be determined to be equal. To be equal, two
* vectors must have the same sparsity structure, and op(ui,vi) must return
* true for all pairs of entries ui and vi that appear in the structure of
* both u and v. The vectors u and/or v can have any type, as long as they
* are valid inputs to the op. If both u and v are NULL, the return value is
* true.
*
* @param[out] result true if u and v are equal (per the op), false otherwise.
* @param[in] u vector to compare.
* @param[in] v vector to compare.
* @param[in] op operator for the comparison.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if result or op are NULL.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_Vector_IsEqualOp
(
// output:
bool *result, // true if u == v, false if u != v or error
// input:
const GrB_Vector u,
const GrB_Vector v,
const GrB_BinaryOp op, // comparator to use
char *msg
) ;
//==============================================================================
// LAGraph Basic algorithms
//==============================================================================
// Basic algorithm are meant to be easy to use. They may encompass many
// underlying Advanced algorithms, each with various parameters that may be
// controlled. For the Basic API, these parameters are determined
// automatically. Cached graph properties may be determined, and as a result,
// the graph G is both an input and an output of these methods, since they may
// be modified.
// LAGraph Basic algorithms are named with the LAGraph_* prefix.
//------------------------------------------------------------------------------
// LAGraph_TriangleCount
//------------------------------------------------------------------------------
/** LAGraph_TriangleCount: count the triangles in a graph. This is a Basic
* algorithm (G->nself_edges, G->out_degree, G->is_symmetric_structure are
* computed, if not present).
*
* @param[out] ntriangles the number of triangles in G.
* @param[in,out] G the graph, which must by undirected, or
* directed but with a symmetric structure.
* No self loops can be present.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if G or ntriangles are NULL.
* @retval LAGRAPH_INVALID_GRAPH if G is invalid
* (@sphinxref{LAGraph_CheckGraph} failed).
* @retval LAGRAPH_NO_SELF_EDGES_ALLOWED if G has any self-edges.
* @retval LAGRAPH_SYMMETRIC_STRUCTURE_REQUIRED if G is directed with an
* unsymmetric G->A matrix.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGraph_TriangleCount
(
// output:
uint64_t *ntriangles, // # of triangles
// input/output:
LAGraph_Graph G,
char *msg
) ;
//==============================================================================
// LAGraph Advanced algorithms and utilities
//==============================================================================
// The Advanced algorithms require the caller to select the algorithm and choose
// any parameter settings. G is not modified, and so it is an input-only
// parameter to these methods. If an Advanced algorithm requires a cached
// graph property to be computed, it must be computed prior to calling the
// Advanced method.
// Advanced algorithms are named with the LAGr_* prefix, to distinguish them
// from Basic algorithms.
//------------------------------------------------------------------------------
// LAGr_Init: start GraphBLAS and LAGraph, and set malloc/etc functions
//------------------------------------------------------------------------------
/** LAGr_Init: initializes GraphBLAS and LAGraph. LAGr_Init is identical to
* @sphinxref{LAGraph_Init}, except that it allows the user application to
* specify the GraphBLAS mode. It also provides four memory management
* functions, replacing the standard `malloc`, `calloc`, `realloc`, and `free`.
* The functions `user_malloc_function`, `user_calloc_function`,
* `user_realloc_function`, and `user_free_function` have the same signature as
* the ANSI C malloc, calloc, realloc, and free functions, respectively. Only
* user_malloc_function and user_free_function are required.
* user_calloc_function may be NULL, in which case `LAGraph_Calloc` uses
* `LAGraph_Malloc` and `memset`. Likewise, user_realloc_function may be NULL,
* in which case `LAGraph_Realloc` uses `LAGraph_Malloc`, `memcpy`, and
* `LAGraph_Free`.
*
* @param[in] mode the mode for GrB_Init
* @param[in] user_malloc_function pointer to a malloc function
* @param[in] user_calloc_function pointer to a calloc function, or NULL
* @param[in] user_realloc_function pointer to a realalloc function, or NULL
* @param[in] user_free_function pointer to a free function
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_INVALID_VALUE if LAGraph_Init or LAGr_Init has already been
* called by the user application.
* @retval GrB_NULL_POINTER if user_malloc_function or user_free_function
* are NULL.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGr_Init
(
// input:
GrB_Mode mode, // mode for GrB_Init
void * (* user_malloc_function ) (size_t),
void * (* user_calloc_function ) (size_t, size_t),
void * (* user_realloc_function ) (void *, size_t),
void (* user_free_function ) (void *),
char *msg
) ;
//------------------------------------------------------------------------------
// LAGr_SortByDegree: sort a graph by its row or column degree
//------------------------------------------------------------------------------
/** LAGr_SortByDegree sorts the nodes of a graph by their out or in degrees.
* The graph G->A itself is not changed. Refer to LAGr_TriangleCount for an
* example of how to permute G->A after calling this function. The output &P
* must be freed by LAGraph_Free. This method requires G->out_degree or
* G->in_degree to already be computed.
*
* @param[out] P permutation of the integers 0..n-1.
* @param[in] G graph of n nodes.
* @param[in] byout if true, sort by out-degree, else sort by in-degree.
* @param[in] ascending if true, sort in ascending order, else descending.
* @param[in,out] msg any error messages.
*
* @retval GrB_NULL_POINTER if P or G are NULL.
* @retval LAGRAPH_NOT_CACHED if G->in_degree or G->out_degree is not computed
* (whichever one is required).
* @retval LAGRAPH_INVALID_GRAPH if G is invalid
* (@sphinxref{LAGraph_CheckGraph} failed).
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGr_SortByDegree
(
// output:
int64_t **P, // permutation vector of size n
// input:
const LAGraph_Graph G, // graph of n nodes
bool byout, // if true, sort G->out_degree, else G->in_degree
bool ascending, // sort in ascending or descending order
char *msg
) ;
//------------------------------------------------------------------------------
// LAGr_SampleDegree: sample the degree median and mean
//------------------------------------------------------------------------------
/** LAGr_SampleDegree computes an estimate of the median and mean of the out or
* in degree, by randomly sampling the G->out_degree or G->in_degree vector.
* This method requires G->out_degree or G->in_degree to already be computed.
*
* @param[out] sample_mean sampled mean of the degree.
* @param[out] sample_median sampled median of the degree.
* @param[in] G graph to sample.
* @param[in] byout if true, sample out-degree, else sample in-degree.
* @param[in] nsamples number of samples to take.
* @param[in] seed random number seed.
* @param[in,out] msg any error messages.
*
* @retval GrB_NULL_POINTER if sample_mean, sample_median, or G are NULL.
* @retval LAGRAPH_NOT_CACHED if G->in_degree or G->out_degree is not computed
* (whichever one is required).
* @retval LAGRAPH_INVALID_GRAPH if G is invalid
* (@sphinxref{LAGraph_CheckGraph} failed).
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGr_SampleDegree
(
// output:
double *sample_mean, // sampled mean degree
double *sample_median, // sampled median degree
// input:
const LAGraph_Graph G, // graph of n nodes
bool byout, // if true, sample G->out_degree, else G->in_degree
int64_t nsamples, // number of samples
uint64_t seed, // random number seed
char *msg
) ;
//------------------------------------------------------------------------------
// LAGr_BreadthFirstSearch: breadth-first search
//------------------------------------------------------------------------------
/** LAGr_BreadthFirstSearch: breadth-first search of a graph, computing the
* breadth-first-search tree and/or the level of the nodes encountered. This
* is an Advanced algorithm. G->AT and G->out_degree are required to use the
* fastest push/pull method when using SuiteSparse:GraphBLAS. If these cached
* properties are not present, or if a vanilla GraphBLAS library is being used,
* then a push-only method is used (which can be slower). G is not modified;
* that is, G->AT and G->out_degree are not computed if not already cached.
*
* @param[out] level If non-NULL on input, on successful return, it
* contains the levels of each node reached. The
* src node is assigned level 0. If a node i is
* not reached, level(i) is not present. The level
* vector is not computed if NULL.
* @param[out] parent If non-NULL on input, on successful return, it
* contains parent node IDs for each node
* reached, where parent(i) is the node ID of the
* parent of node i. The src node will have itself
* as its parent. If a node i is not reached,
* parent(i) is not present. The parent vector is
* not computed if NULL.
* @param[in] G The graph, directed or undirected.
* @param[in] src The index of the src node (0-based)
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_INVALID_INDEX if src is invalid.
* @retval GrB_NULL_POINTER if both level and parent are NULL, or if
* G is NULL.
* @retval LAGRAPH_INVALID_GRAPH Graph is invalid
* (@sphinxref{LAGraph_CheckGraph} failed).
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGr_BreadthFirstSearch
(
// output:
GrB_Vector *level,
GrB_Vector *parent,
// input:
const LAGraph_Graph G,
GrB_Index src,
char *msg
) ;
//------------------------------------------------------------------------------
// LAGr_ConnectedComponents: connected components of an undirected graph
//------------------------------------------------------------------------------
/** LAGr_ConnectedComponents: connected components of an undirected graph.
* This is an Advanced algorithm (G->is_symmetric_structure must be known).
*
* @param[out] component component(i)=s if node i is in the component whose
* representative node is s. If node i has no edges,
* it is placed in its own component, and thus the
* component vector is always dense.
* @param[in] G input graph to find the components for.
* The graph must be undirected, or
* G->is_symmetric_structure must be true.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if G or component are NULL.
* @retval LAGRAPH_INVALID_GRAPH Graph is invalid
* (@sphinxref{LAGraph_CheckGraph} failed).
* @retval LAGRAPH_SYMMETRIC_STRUCTURE_REQUIRED if G is directed with an
* unsymmetric G->A matrix.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGr_ConnectedComponents
(
// output:
GrB_Vector *component,
// input:
const LAGraph_Graph G, // input graph
char *msg
) ;
//------------------------------------------------------------------------------
// LAGr_SingleSourceShortestPath: single-source shortest paths
//------------------------------------------------------------------------------
/** LAGr_SingleSourceShortestPath: single-source shortest paths. This is an
* Advanced algorithm (G->emin is required for best performance). The graph G
* must have an adjacency matrix of type GrB_INT32, GrB_INT64, GrB_UINT32,
* GrB_UINT64, GrB_FP32, or GrB_FP64. If G->A has any other type,
* GrB_NOT_IMPLEMENTED is returned.
*
* @param[out] path_length path_length (i) is the length of the shortest
* path from the source node to node i. The path_length vector is dense.
* If node (i) is not reachable from the src node, then path_length (i) is
* set to INFINITY for GrB_FP32 and FP32, or the maximum integer for
* GrB_INT32, INT64, UINT32, or UINT64.
* @param[in] G input graph.
* @param[in] src source node.
* @param[in] Delta for delta stepping.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if G or path_length are NULL.
* @retval GrB_INVALID_INDEX if src is invalid.
* @retval GrB_EMPTY_OBJECT if Delta does not contain a value.
* @retval GrB_NOT_IMPLEMENTED if the type is not supported.
* @retval LAGRAPH_INVALID_GRAPH Graph is invalid
* (@sphinxref{LAGraph_CheckGraph} failed).
* @returns any GraphBLAS errors that may have been encountered.
*/
// FUTURE: add a Basic algorithm that computes G->emin, G->emax, and then uses
// that information to compute an appropriate (estimated) Delta.
LAGRAPH_PUBLIC
int LAGr_SingleSourceShortestPath
(
// output:
GrB_Vector *path_length,
// input:
const LAGraph_Graph G,
GrB_Index src,
GrB_Scalar Delta, // delta value for delta stepping
char *msg
) ;
//------------------------------------------------------------------------------
// LAGr_Betweenness: betweeness centrality metric
//------------------------------------------------------------------------------
/** LAGr_Betweenness: betweeness centrality metric. This methods computes an
* approximation of the betweeness-centrality metric of all nodes in the graph.
* Only a few given source nodes are used for the approximation. This is an
* Advanced algorithm (G->AT is required).
*
* @param[out] centrality centrality(i) is the metric for node i.
* @param[in] G input graph.
* @param[in] sources source vertices to compute shortest paths, size ns
* @param[in] ns number of source vertices.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if G, centrality, and/our sources are NULL.
* @retval GrB_INVALID_INDEX if any source node is invalid.
* @retval LAGRAPH_INVALID_GRAPH Graph is invalid
* (@sphinxref{LAGraph_CheckGraph} failed).
* @retval LAGRAPH_NOT_CACHED if G->AT is required but not present.
* @returns any GraphBLAS errors that may have been encountered.
*/
// FUTURE: create a Basic algorithm that randomly selects source nodes, or
// computes the exact centrality with all nodes as sources (which is very
// costly).
LAGRAPH_PUBLIC
int LAGr_Betweenness
(
// output:
GrB_Vector *centrality, // centrality(i): betweeness centrality of i
// input:
const LAGraph_Graph G, // input graph
const GrB_Index *sources, // source vertices to compute shortest paths
int32_t ns, // number of source vertices
char *msg
) ;
//------------------------------------------------------------------------------
// LAGr_PageRank: PageRank of a graph.
//------------------------------------------------------------------------------
/** LAGr_PageRank: computes the standard PageRank of a directed graph G. Sinks
* (nodes with no out-going edges) are properly handled. This method should be
* used for production, not for the GAP benchmark. This is an Advanced
* algorithm (G->AT and G->out_degree are required).
*
* @param[out] centrality centrality(i) is the PageRank of node i.
* @param[out] iters number of iterations taken.
* @param[in] G input graph.
* @param[in] damping damping factor (typically 0.85).
* @param[in] tol stopping tolerance (typically 1e-4).
* @param[in] itermax maximum number of iterations (typically 100).
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if G, centrality, and/our iters are NULL.
* @retval LAGRAPH_NOT_CACHED if G->AT is required but not present,
* or if G->out_degree is not present.
* @retval LAGRAPH_INVALID_GRAPH Graph is invalid
* (@sphinxref{LAGraph_CheckGraph} failed).
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGr_PageRank
(
// output:
GrB_Vector *centrality,
int *iters,
// input:
const LAGraph_Graph G,
float damping,
float tol,
int itermax,
char *msg
) ;
//------------------------------------------------------------------------------
// LAGr_PageRankGAP: GAP-style PageRank of a graph (for GAP benchmarking only)
//------------------------------------------------------------------------------
// LAGr_PageRankGAP: computes the GAP PageRank of a directed graph G. Sinks
// (nodes with no out-going edges) are NOT properly handled. This method
// should be NOT be used for production. It is intended for the GAP benchmark
// only. This is an Advanced algorithm (G->AT and G->out_degree are required).
// The parameters and return values are the same as LAGr_PageRank.
LAGRAPH_PUBLIC
int LAGr_PageRankGAP
(
// output:
GrB_Vector *centrality,
int *iters,
// input:
const LAGraph_Graph G,
float damping,
float tol,
int itermax,
char *msg
) ;
//------------------------------------------------------------------------------
// LAGr_TriangleCount: triangle counting
//------------------------------------------------------------------------------
/** LAGr_TriangleCount_Method: an enum to select the method used to count the
* number of triangles.
*/
typedef enum
{
LAGr_TriangleCount_AutoMethod = 0, ///< auto selection of method
LAGr_TriangleCount_Burkhardt = 1, ///< sum (sum ((A^2) .* A)) / 6
LAGr_TriangleCount_Cohen = 2, ///< sum (sum ((L * U) .* A)) / 2
LAGr_TriangleCount_Sandia_LL = 3, ///< sum (sum ((L * L) .* L))
LAGr_TriangleCount_Sandia_UU = 4, ///< sum (sum ((U * U) .* U))
LAGr_TriangleCount_Sandia_LUT = 5, ///< sum (sum ((L * U') .* L))
LAGr_TriangleCount_Sandia_ULT = 6, ///< sum (sum ((U * L') .* U))
}
LAGr_TriangleCount_Method ;
/** LAGr_TriangleCount_Presort: an enum to control if/how the matrix is sorted
* prior to counting triangles.
*/
typedef enum
{
LAGr_TriangleCount_NoSort = 2, ///< no sort
LAGr_TriangleCount_Ascending = 1, ///< sort by degree, ascending.
LAGr_TriangleCount_Descending = -1, ///< sort by degree, descending.
LAGr_TriangleCount_AutoSort = 0, ///< auto selection of presort:
///< No presort is done for the Burkhardt or Cohen methods, and
///< no sort is done for the Sandia_* methods if the sampled mean
///< out-degree is <= 4 * the sample median out-degree.
///< Otherwise: sort in ascending order for Sandia_LL and Sandia_LUT,
///< descending ordering for Sandia_UU and Sandia_ULT. On output,
///< presort is modified to reflect the sorting method used (NoSort,
///< Ascending, or Descending).
}
LAGr_TriangleCount_Presort ;
/** LAGr_TriangleCount: count the triangles in a graph (advanced API).
*
* @param[out] ntriangles the number of triangles in G.
* @param[in] G The graph, which must be undirected or have
* G->is_symmetric_structure true, with no self loops.
* G->nself_edges, G->out_degree, and
* G->is_symmetric_structure are required.
* @param[in,out] method specifies which algorithm to use, and returns
* the method chosen. If NULL, the AutoMethod is
* used, and the method is not reported. Also see the
* LAGr_TriangleCount_Method enum description.
* @param[in,out] presort controls the presort of the graph, and returns the
* presort chosen. If NULL, the AutoSort is used, and
* the presort method is not reported. Also see the
* description of the LAGr_TriangleCount_Presort enum.
* @param[in,out] msg any error messages.
*
* @retval GrB_SUCCESS if successful.
* @retval GrB_NULL_POINTER if G or ntriangles are NULL.
* @retval LAGRAPH_INVALID_GRAPH Graph is invalid
* (@sphinxref{LAGraph_CheckGraph} failed).
* @retval LAGRAPH_NO_SELF_EDGES_ALLOWED if G has any self-edges, or if
* G->nself_edges is not computed.
* @retval LAGRAPH_SYMMETRIC_STRUCTURE_REQUIRED if G is directed with an
* unsymmetric G->A matrix.
* @retval LAGRAPH_NOT_CACHED if G->out_degree is not present in G.
* @retval GrB_INVALID_VALUE method or presort are invalid.
* @returns any GraphBLAS errors that may have been encountered.
*/
LAGRAPH_PUBLIC
int LAGr_TriangleCount
(
// output:
uint64_t *ntriangles,
// input:
const LAGraph_Graph G,
LAGr_TriangleCount_Method *method,
LAGr_TriangleCount_Presort *presort,
char *msg
) ;
#if defined ( __cplusplus )
}
#endif
#endif
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