File: README.md

package info (click to toggle)
surpyvor 0.5-2
  • links: PTS, VCS
  • area: main
  • in suites: bookworm, forky, sid, trixie
  • size: 120 kB
  • sloc: python: 515; sh: 20; makefile: 4
file content (12 lines) | stat: -rw-r--r-- 528 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
# surpyvor
A python wrapper around [SURVIVOR](https://github.com/fritzsedlazeck/SURVIVOR), with additional convenience functions.


## sub-commands:
    merge               merging vcf files of SVs
    highsens            get union of SV vcfs
    highconf            get intersection of SV vcfs
    prf                 calculate precision, recall and F-measure
    upset               Make upset plot for multiple SV vcf files

Each sub-command has its own help information, accessible by running `surpyvor <command> -h/--help`