1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
|
From: Helmut Grohne <helmut@subdivi.de>
Date: Fri, 30 Oct 2020 20:43:21 +0100
Bug-Debian: https://bugs.debian.org/973450
Description: Do not hard code the build architecture compiler
--- a/Debug/makefile
+++ b/Debug/makefile
@@ -56,7 +56,7 @@ all: SURVIVOR
SURVIVOR: $(OBJS) $(USER_OBJS)
@echo 'Building target: $@'
@echo 'Invoking: Cross G++ Linker'
- g++ -o $@ $(OBJS) $(USER_OBJS) $(LIBS)
+ $(CXX) -o $@ $(OBJS) $(USER_OBJS) $(LIBS)
@echo 'Finished building target: $@'
@echo ' '
--- a/Debug/src/analysis_sv/subdir.mk
+++ b/Debug/src/analysis_sv/subdir.mk
@@ -32,7 +32,7 @@ CPP_DEPS += \
src/analysis_sv/%.o: ../src/analysis_sv/%.cpp
@echo 'Building file: $<'
@echo 'Invoking: Cross G++ Compiler'
- g++ -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
+ $(CXX) -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
@echo 'Finished building: $<'
@echo ' '
--- a/Debug/src/convert/subdir.mk
+++ b/Debug/src/convert/subdir.mk
@@ -47,7 +47,7 @@ CPP_DEPS += \
src/convert/%.o: ../src/convert/%.cpp
@echo 'Building file: $<'
@echo 'Invoking: Cross G++ Compiler'
- g++ -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
+ $(CXX) -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
@echo 'Finished building: $<'
@echo ' '
--- a/Debug/src/merge_vcf/subdir.mk
+++ b/Debug/src/merge_vcf/subdir.mk
@@ -20,7 +20,7 @@ CPP_DEPS += \
src/merge_vcf/%.o: ../src/merge_vcf/%.cpp
@echo 'Building file: $<'
@echo 'Invoking: Cross G++ Compiler'
- g++ -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
+ $(CXX) -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
@echo 'Finished building: $<'
@echo ' '
--- a/Debug/src/phasing/subdir.mk
+++ b/Debug/src/phasing/subdir.mk
@@ -17,7 +17,7 @@ CPP_DEPS += \
src/phasing/%.o: ../src/phasing/%.cpp
@echo 'Building file: $<'
@echo 'Invoking: Cross G++ Compiler'
- g++ -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
+ $(CXX) -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
@echo 'Finished building: $<'
@echo ' '
--- a/Debug/src/scrup_vcf/subdir.mk
+++ b/Debug/src/scrup_vcf/subdir.mk
@@ -17,7 +17,7 @@ CPP_DEPS += \
src/scrup_vcf/%.o: ../src/scrup_vcf/%.cpp
@echo 'Building file: $<'
@echo 'Invoking: Cross G++ Compiler'
- g++ -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
+ $(CXX) -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
@echo 'Finished building: $<'
@echo ' '
--- a/Debug/src/simulator/subdir.mk
+++ b/Debug/src/simulator/subdir.mk
@@ -32,7 +32,7 @@ CPP_DEPS += \
src/simulator/%.o: ../src/simulator/%.cpp
@echo 'Building file: $<'
@echo 'Invoking: Cross G++ Compiler'
- g++ -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
+ $(CXX) -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
@echo 'Finished building: $<'
@echo ' '
--- a/Debug/src/snp_overlap/subdir.mk
+++ b/Debug/src/snp_overlap/subdir.mk
@@ -17,7 +17,7 @@ CPP_DEPS += \
src/snp_overlap/%.o: ../src/snp_overlap/%.cpp
@echo 'Building file: $<'
@echo 'Invoking: Cross G++ Compiler'
- g++ -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
+ $(CXX) -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
@echo 'Finished building: $<'
@echo ' '
--- a/Debug/src/subdir.mk
+++ b/Debug/src/subdir.mk
@@ -29,7 +29,7 @@ CPP_DEPS += \
src/%.o: ../src/%.cpp
@echo 'Building file: $<'
@echo 'Invoking: Cross G++ Compiler'
- g++ -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
+ $(CXX) -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
@echo 'Finished building: $<'
@echo ' '
--- a/Debug/src/vcfs/subdir.mk
+++ b/Debug/src/vcfs/subdir.mk
@@ -35,7 +35,7 @@ CPP_DEPS += \
src/vcfs/%.o: ../src/vcfs/%.cpp
@echo 'Building file: $<'
@echo 'Invoking: Cross G++ Compiler'
- g++ -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
+ $(CXX) -O3 -g3 -Wall -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@)" -o "$@" "$<"
@echo 'Finished building: $<'
@echo ' '
|
