File: OGs.html

package info (click to toggle)
swissknife 1.80-1
  • links: PTS, VCS
  • area: main
  • in suites: bookworm, sid, trixie
  • size: 5,964 kB
  • sloc: perl: 8,963; sh: 16; makefile: 5
file content (87 lines) | stat: -rw-r--r-- 1,742 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
<?xml version="1.0" ?>
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title>SWISS::OGs</title>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<link rev="made" href="mailto:support@ActiveState.com" />
</head>

<body>



<ul id="index">
  <li><a href="#Name">Name</a></li>
  <li><a href="#Description">Description</a></li>
  <li><a href="#Inherits-from">Inherits from</a></li>
  <li><a href="#Attributes">Attributes</a>
    <ul>
      <li><a href="#Standard-methods">Standard methods</a></li>
    </ul>
  </li>
  <li><a href="#POD-ERRORS">POD ERRORS</a></li>
</ul>

<h1 id="Name">Name</h1>

<p>SWISS::OGs</p>

<h1 id="Description">Description</h1>

<p><b>SWISS::OGs</b> represents the OG lines within an SWISS-PROT + TrEMBL entry as specified in the user manual http://www.expasy.org/sprot/userman.html . The OGs object is a container object which holds a list of SWISS::OG objects.</p>

<h1 id="Inherits-from">Inherits from</h1>

<p>SWISS::ListBase.pm</p>

<h1 id="Attributes">Attributes</h1>

<dl>

<dt id="list"><code>list</code></dt>
<dd>

<pre><code>  Each list element is a SWISS::OG object.</code></pre>

</dd>
</dl>

<h2 id="Standard-methods">Standard methods</h2>

<dl>

<dt id="new">new</dt>
<dd>

</dd>
<dt id="fromText">fromText</dt>
<dd>

</dd>
<dt id="toText">toText</dt>
<dd>

</dd>
</dl>

<h1 id="POD-ERRORS">POD ERRORS</h1>

<p>Hey! <b>The above document had some coding errors, which are explained below:</b></p>

<dl>

<dt id="Around-line-151">Around line 151:</dt>
<dd>

<p>=back doesn&#39;t take any parameters, but you said =back  =head1 Methods</p>

</dd>
</dl>


</body>

</html>