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Folder: example
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- | rw-r--r-- | 44 | 3V2U.aln.list |
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- | rw-r--r-- | 4,716 | 3V2U.contact_lib |
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- | rw-r--r-- | 18 | 3V2U.contact_lib.list |
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- | rw-r--r-- | 2,582,037 | 3V2U.pdb |
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- | rw-r--r-- | 38 | 3V2U.species |
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- | rw-r--r-- | 68 | 3V2U.template |
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- | rw-r--r-- | 4,690 | 3V2UA.aln |
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- | rw-r--r-- | 4,690 | 3V2UB.aln |
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- | rw-r--r-- | 5,279 | 3V2UC.aln |
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- | rw-r--r-- | 5,279 | 3V2UD.aln |
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- | rwxr-xr-x | 112,966 | 5FCRD.pdb |
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- | rwxr-xr-x | 114 | CCsed.script |
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- | rwxr-xr-x | 6,096 | RNAplfold2tclib.pl |
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- | rw-r--r-- | 253 | Ssample_aln1.dnd |
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- | rw-r--r-- | 22,344 | alirna.ps |
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- | rwxr-xr-x | 440 | any_file2unix_file.pl |
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- | rw-r--r-- | 5,987 | b11.aln |
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- | rw-r--r-- | 3,444 | b11.cache |
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- | rw-r--r-- | 423 | b11.dnd |
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- | rw-r--r-- | 3,111 | b11.fa |
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- | rw-r--r-- | 6,420 | b11.score_ascii |
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- | rw-r--r-- | 5,999 | b11.tcmafft |
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- | rw-r--r-- | 46,945 | b11.tcmafft.html |
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- | rw-r--r-- | 8,887 | b30.aln |
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- | rw-r--r-- | 93,339 | b30.aln.html |
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- | rw-r--r-- | 9,327 | b80.aln |
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- | rw-r--r-- | 100,576 | b80.aln.html |
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- | rwxr-xr-x | 2,846 | blast_aln2fasta_aln.pl |
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- | rwxr-xr-x | 8,754 | blast_xml2fasta_aln.pl |
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- | rwxr-xr-x | 9,849 | blastpgp.pl |
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- | rw-r--r-- | 929 | block1.aln |
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- | rw-r--r-- | 1,529 | block2.aln |
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- | rw-r--r-- | 24,621 | c18orf19.aln |
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- | rw-r--r-- | 164 | c18orf19.dnd |
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- | rw-r--r-- | 10,267 | c18orf19.fa |
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- | rw-r--r-- | 84,415 | c18orf19.html |
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- | rw-r--r-- | 961 | c18orf19_chipseq.aln |
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- | rw-r--r-- | 274 | cache.aln |
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- | rw-r--r-- | 105 | cache.seq |
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- | rw-r--r-- | 612 | charge_relay_lib.tc_lib |
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- | rw-r--r-- | 2,577 | chewbacca |
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- | rw-r--r-- | 25,725 | chewbacca.html |
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- | rwxr-xr-x | 5,684 | clean_cache.pl |
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- | rw-r--r-- | 613 | clustal_text |
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- | rw-r--r-- | 4,968 | clustal_text.html |
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- | rwxr-xr-x | 2,273 | clustalw_aln2fasta_aln.pl |
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- | rwxr-xr-x | 265 | clustalw_method.tc_method |
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- | rw-r--r-- | 7,458 | color_cons.html |
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- | rw-r--r-- | 7,231 | color_cons_box.html |
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- | rw-r--r-- | 2,679 | color_dnaseq3.html |
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- | rw-r--r-- | 4,224 | color_dnaseq3.pdf |
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- | rw-r--r-- | 2,045 | color_dnaseq3_lib.html |
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- | rw-r--r-- | 19,153 | combined_profiles.aln |
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- | rw-r--r-- | 93,036 | combined_profiles.aln.html |
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- | rwxr-xr-x | 526 | count.pl |
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- | rwxr-xr-x | 6,762 | dalilite.pl |
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- | rw-r--r-- | 38,805 | dna.filter |
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- | rw-r--r-- | 776,100 | dna.replicates |
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- | rwxr-xr-x | 231 | excel2fasta.pl |
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- | rwxr-xr-x | 96,932 | extract_from_pdb |
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- | rwxr-xr-x | 296 | fasta_aln2fasta_aln_unique_name.pl |
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- | rwxr-xr-x | 1,222 | fasta_seq2RNAplfold_templatefile.pl |
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- | rwxr-xr-x | 4,988 | fasta_seq2consan_aln.pl |
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- | rwxr-xr-x | 21,023 | fasta_seq2hmmtop_fasta.pl |
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- | rw-r--r-- | 13,495 | g0.aln |
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- | rw-r--r-- | 10,493 | g10.aln |
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- | rw-r--r-- | 10,493 | g15.aln |
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- | rw-r--r-- | 10,493 | g5.aln |
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- | rwxr-xr-x | 4,847 | generic_method.tc_method |
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- | rw-r--r-- | 205 | group_3Dseq1.fasta |
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- | rw-r--r-- | 4,393 | han_solo |
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- | rw-r--r-- | 24,344 | han_solo.html |
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- | rw-r--r-- | 2,984 | hmgb_chite.prf |
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- | rw-r--r-- | 105 | hmgb_chite.tmp |
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- | rw-r--r-- | 2,833 | hmgl_trybr.prf |
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- | rw-r--r-- | 98 | hmgl_trybr.tmp |
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- | rw-r--r-- | 3,085 | hmgl_wheat.prf |
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- | rw-r--r-- | 110 | hmgl_wheat.tmp |
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- | rw-r--r-- | 2,925 | hmgt_mouse.prf |
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- | rw-r--r-- | 101 | hmgt_mouse.tmp |
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- | rwxr-xr-x | 53,931 | install.pl |
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- | rw-r--r-- | 35,073 | lalign_id_pair_seq1.tc_lib |
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- | rw-r--r-- | 613 | luke_skywalker.aln |
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- | rw-r--r-- | 95 | luke_skywalker.dnd |
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- | rw-r--r-- | 6,549 | luke_skywalker.html |
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- | rwxr-xr-x | 1,719 | make_license.pl |
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- | rwxr-xr-x | 743 | mocca |
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- | rwxr-xr-x | 10,428 | msa2bootstrap.pl |
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- | rwxr-xr-x | 661 | msf_aln2fasta_aln.pl |
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- | rwxr-xr-x | 2,459 | nature_protocol.pl |
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- | rwxr-xr-x | 30,932 | ncbiblast_lwp.pl |
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- | rwxr-xr-x | 250 | newick2name_list.pl |
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- | rw-r--r-- | 2,196 | out.ascii |
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- | rw-r--r-- | 26,310 | out.html |
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- | rw-r--r-- | 39,940 | out.tab |
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- | rw-r--r-- | 34,484 | out_aln.html |
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- | rw-r--r-- | 3,206 | outaln |
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- | rw-r--r-- | 27,121 | outaln.html |
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- | rw-r--r-- | 9,679 | p350.aln |
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- | rw-r--r-- | 0 | ph_tree_scan.txt |
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- | rw-r--r-- | 4,508 | prf1.aln |
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- | rw-r--r-- | 514 | prf1.dnd |
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- | rw-r--r-- | 23,985 | prf1.html |
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- | rw-r--r-- | 57 | prf1_1.dnd |
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- | rw-r--r-- | 7,030 | prf2.aln |
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- | rw-r--r-- | 10,446 | prf3.aln |
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- | rwxr-xr-x | 5,366 | process_list.pl |
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- | rw-r--r-- | 4,647 | profile1_pdb1.aln |
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- | rw-r--r-- | 3,708 | profile1_pdb1.fasta |
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- | rw-r--r-- | 9,148 | profile1_pdb1_1.aln |
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- | rw-r--r-- | 37,704 | profile1_pdb1_1.html |
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- | rw-r--r-- | 5,123 | profile2_pdb2.aln |
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- | rw-r--r-- | 398 | profile2_pdb2.dnd |
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- | rw-r--r-- | 3,890 | profile2_pdb2.fasta |
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- | rw-r--r-- | 2,524 | profile_aln |
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- | rw-r--r-- | 17,903 | profile_aln.html |
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- | rw-r--r-- | 4,150 | proteases1_small.aln |
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- | rw-r--r-- | 8,311 | proteases1_small.clustalw |
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- | rw-r--r-- | 759 | proteases1_small.dnd |
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- | rw-r--r-- | 3,890 | proteases1_small.fasta |
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- | rw-r--r-- | 8,024 | proteases1_small.fasta_aln |
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- | rw-r--r-- | 45,130 | proteases1_small.html |
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- | rw-r--r-- | 10,150 | proteases1_small.msf |
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- | rw-r--r-- | 3,763 | proteases2_small.aln |
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- | rw-r--r-- | 345 | proteases2_small.dnd |
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- | rw-r--r-- | 3,708 | proteases2_small.fasta |
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- | rw-r--r-- | 36,827 | proteases2_small.html |
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- | rw-r--r-- | 7,893 | proteases_chain.fasta |
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- | rw-r--r-- | 213,969 | proteases_large.aln |
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- | rw-r--r-- | 4,362 | proteases_large.code_name |
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- | rw-r--r-- | 67,571 | proteases_large.coded.fasta |
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- | rw-r--r-- | 7,193 | proteases_large.dnd |
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- | rw-r--r-- | 30,112 | proteases_large.fasta |
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- | rw-r--r-- | 880,302 | proteases_large.html |
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- | rw-r--r-- | 186,646 | proteases_large.muscle |
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- | rw-r--r-- | 8,714 | proteases_oneseq.aln |
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- | rw-r--r-- | 299 | proteases_oneseq.fasta |
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- | rw-r--r-- | 50,275 | proteases_oneseq.html |
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- | rw-r--r-- | 51 | proteases_pair.fasta |
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- | rw-r--r-- | 9,615 | proteases_small.aln |
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- | rw-r--r-- | 8,607 | proteases_small.b62_aln |
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- | rw-r--r-- | 79,541 | proteases_small.b62_aln.html |
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- | rw-r--r-- | 8,211 | proteases_small.clustalw |
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- | rw-r--r-- | 759 | proteases_small.dnd |
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- | rw-r--r-- | 188,938 | proteases_small.expanded_fasta_aln |
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- | rw-r--r-- | 1,683 | proteases_small.fasta |
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- | rw-r--r-- | 6,948 | proteases_small.fasta_aln |
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- | rw-r--r-- | 5,388 | proteases_small.fasta~ |
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- | rw-r--r-- | 57,631 | proteases_small.html |
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- | rw-r--r-- | 10,150 | proteases_small.msf |
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- | rw-r--r-- | 5,502 | proteases_small.pir_seq |
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- | rw-r--r-- | 197 | proteases_small.template |
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- | rw-r--r-- | 621 | proteases_small.template~ |
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- | rw-r--r-- | 15,314 | proteases_small_dna.fasta |
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- | rw-r--r-- | 10,493 | proteases_small_g10.aln |
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- | rw-r--r-- | 70,836 | proteases_small_g10.html |
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- | rw-r--r-- | 621 | proteases_small_pdb1.template_list |
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- | rw-r--r-- | 621 | proteases_small_pdb2.template_list |
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- | rw-r--r-- | 668 | proteases_small_prf1.template_list |
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- | rwxr-xr-x | 5,007 | rec_sum.pl |
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- | rwxr-xr-x | 498 | rnapdb2protpdb.pl |
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- | rw-r--r-- | 1,882 | sample_3Dseq1.aln |
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- | rw-r--r-- | 58 | sample_3Dseq1.fake |
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- | rw-r--r-- | 1,099 | sample_3Dseq1.fasta |
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- | rw-r--r-- | 501 | sample_3Dseq1.mafftnewick |
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- | rw-r--r-- | 9,449 | sample_3Dseq1.struc_tree.consense_output |
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- | rw-r--r-- | 681 | sample_3Dseq1.struc_tree.consensus |
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- | rw-r--r-- | 18,552 | sample_3Dseq1.struc_tree.html |
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- | rw-r--r-- | 6,727 | sample_3Dseq1.struc_tree.list |
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- | rw-r--r-- | 278,217 | sample_3Dseq1.tc_lib |
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- | rw-r--r-- | 566 | sample_3Dseq1.template |
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- | rw-r--r-- | 661 | sample_3Dseq1.tree |
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- | rw-r--r-- | 1,780 | sample_3Dseq2.aln |
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- | rw-r--r-- | 694 | sample_3Dseq2.dnd |
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- | rw-r--r-- | 1,145 | sample_3Dseq2.fasta |
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- | rw-r--r-- | 27,429 | sample_3Dseq2.html |
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- | rw-r--r-- | 9,977 | sample_3Dseq2.struc_tree.consense_output |
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- | rw-r--r-- | 732 | sample_3Dseq2.struc_tree.consensus |
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- | rw-r--r-- | 19,107 | sample_3Dseq2.struc_tree.html |
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- | rw-r--r-- | 9,208 | sample_3Dseq2.struc_tree.list |
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- | rw-r--r-- | 612 | sample_3Dseq2.template |
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- | rw-r--r-- | 2,887 | sample_aln1.aln |
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- | rw-r--r-- | 28,442 | sample_aln1.html |
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- | rw-r--r-- | 3,371 | sample_aln1.msf |
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- | rw-r--r-- | 3,014 | sample_aln1.score_ascii |
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- | rw-r--r-- | 37,966 | sample_aln1.tc_lib |
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- | rw-r--r-- | 643 | sample_aln1_1.aln |
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- | rw-r--r-- | 6,597 | sample_aln1_1.html |
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- | rw-r--r-- | 698 | sample_aln1_1.score_ascii |
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- | rw-r--r-- | 623 | sample_aln1_2.aln |
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- | rw-r--r-- | 1,814 | sample_aln2.aln |
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- | rw-r--r-- | 332 | sample_aln3.aln |
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- | rw-r--r-- | 332 | sample_aln5.aln |
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- | rw-r--r-- | 5,671 | sample_dna_thread.fa |
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- | rw-r--r-- | 4,105 | sample_dnaseq1.aln |
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- | rw-r--r-- | 94 | sample_dnaseq1.dnd |
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- | rw-r--r-- | 2,387 | sample_dnaseq1.fasta |
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- | rw-r--r-- | 20,235 | sample_dnaseq1.html |
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- | rw-r--r-- | 335 | sample_dnaseq2.aln |
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- | rw-r--r-- | 323 | sample_dnaseq2.cache |
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- | rw-r--r-- | 105 | sample_dnaseq2.fasta |
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- | rw-r--r-- | 336 | sample_dnaseq3.aln |
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- | rw-r--r-- | 105 | sample_dnaseq3.cache |
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- | rw-r--r-- | 231 | sample_dnaseq3.tc_lib |
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- | rw-r--r-- | 35,073 | sample_lib1.mocca_lib |
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- | rw-r--r-- | 38,005 | sample_lib1.tc_lib |
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- | rw-r--r-- | 160,611 | sample_lib2.tc_lib |
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- | rw-r--r-- | 167,731 | sample_lib3 |
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- | rw-r--r-- | 179,665 | sample_lib3.tc_lib |
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- | rw-r--r-- | 79 | sample_lib3.tc_lib02 |
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- | rw-r--r-- | 108 | sample_list1.lib_list |
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- | rw-r--r-- | 51 | sample_param_file.param |
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- | rw-r--r-- | 1,093 | sample_profile1.aln |
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- | rw-r--r-- | 1,460 | sample_profile1_1.aln |
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- | rw-r--r-- | 6,639 | sample_profile1_1.html |
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- | rw-r--r-- | 833 | sample_profile2.aln |
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- | rw-r--r-- | 3,037 | sample_prot_thread.aln |
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- | rw-r--r-- | 261 | sample_prot_thread.dnd |
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- | rw-r--r-- | 1,995 | sample_prot_thread.fa |
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- | rw-r--r-- | 29,824 | sample_prot_thread.html |
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- | rw-r--r-- | 3,270 | sample_prot_thread.score_ascii |
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- | rw-r--r-- | 1,044 | sample_rnaseq1.aln |
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- | rw-r--r-- | 178 | sample_rnaseq1.dnd |
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- | rw-r--r-- | 713 | sample_rnaseq1.fasta |
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- | rw-r--r-- | 15,423 | sample_rnaseq1.html |
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- | rw-r--r-- | 272 | sample_rnaseq1_rfold1.template_list |
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- | rw-r--r-- | 1,624 | sample_rnaseq2.alifold |
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- | rw-r--r-- | 4,506 | sample_rnaseq2.aln |
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- | rw-r--r-- | 2,174 | sample_rnaseq2.cons.stk |
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- | rw-r--r-- | 4,568 | sample_rnaseq2.cw.stk |
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- | rw-r--r-- | 4,568 | sample_rnaseq2.stk |
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- | rw-r--r-- | 4,568 | sample_rnaseq2.tcoffee.stk |
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- | rw-r--r-- | 633 | sample_seq1.aln |
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- | rw-r--r-- | 3,472 | sample_seq1.aln.html |
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- | rw-r--r-- | 539 | sample_seq1.clustalw |
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- | rw-r--r-- | 95 | sample_seq1.dnd |
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- | rw-r--r-- | 12,886 | sample_seq1.expanded_fasta_aln |
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- | rw-r--r-- | 347 | sample_seq1.fasta |
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- | rw-r--r-- | 3,871 | sample_seq1.html |
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- | rw-r--r-- | 304 | sample_seq1.list |
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- | rw-r--r-- | 735 | sample_seq1.msf |
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- | rw-r--r-- | 735 | sample_seq1.msf_aln |
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- | rw-r--r-- | 677 | sample_seq1.score_ascii |
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- | rw-r--r-- | 66 | sample_seq1.score_csv |
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- | rw-r--r-- | 5,468 | sample_seq1.score_html |
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- | rw-r--r-- | 7,759 | sample_seq1.score_pdf |
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- | rw-r--r-- | 92,712 | sample_seq1.score_ps |
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