File: sample_aln3.aln

package info (click to toggle)
t-coffee 8.84-1
  • links: PTS, VCS
  • area: main
  • in suites: squeeze
  • size: 17,756 kB
  • ctags: 5,178
  • sloc: ansic: 93,362; fortran: 2,049; perl: 1,597; makefile: 14
file content (14 lines) | stat: -rw-r--r-- 633 bytes parent folder | download | duplicates (7) 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
 
CLUSTAL W (1.83) multiple sequence alignment


hmgb_chite      -ADK--PKR-PLSAYMLWLNSARESIKRENPDFK-VTEVAKKGGELWRGL--K-DKSEWE
hmgl_wheat      DPNK--PKRAP-SAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLS-ESEKAPYV
hmgl_trybr      KKDSNAPKR-AMTSF-MFFS---SDFRSKHSDLS-IVEMSKAAGAAWKELGPE-ERKVYE
hmgt_mouse      -K----PKR-PRSAYNIYVS---ESFQEAKDDSA-QGKL-KLVNEAWKNLSPE-EKQAYI
                      *** . ::: ::..   ..::  : .      : *  .  *: *  : ::  : 

hmgb_chite      AKAATAKQNYIRALQEYER-NGG
hmgl_wheat      AKANKLKGEYNKAIAAYNKGESA
hmgl_trybr      EMAEKDKERYKREM---------
hmgt_mouse      QLAKDDRIRYDNEMKSWEEQMAE
                  *   : .* . :