File: sproteases_small.mcoffee

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CLUSTAL FORMAT for T-COFFEE Version_4.38 [http://www.tcoffee.org], CPU=18.85 sec, SCORE=94, Nseq=19, Len=334 

sp|O35205|GRAK_MOUSE   MRFSS-----W---A-LVSLVAGVY----------------------MSSECFHTEIIGG
sp|Q7YRZ7|GRAA_BOVIN   MNIPFPFSFPP---AICLLLIPGVF-------------------------PVSCEGIIGG
sp|P08884|GRAE_MOUSE   M-------------P-PVLILLTLL----------------------LPLGAGAEEIIGG
sp|Q06606|GRZ2_RAT     M-------------F-LFLFFLVAI----------------------LPVNTEGGEIIWG
sp|P21844|MCPT5_MOUSE  M---------H---L-LTLHLLLLL----------------------LGSSTKAGEIIGG
sp|P03953|CFAD_MOUSE   MHSSV-----Y---F-VALVILGAA----------------------VCAAQPRGRILGG
sp|P00773|ELA1_RAT     ML-----RFLVF---ASLVLYGHST----------------------QDFPETNARVVGG
sp|Q00871|CTRB1_PENVA  MI-----GKLSLLLVCVAVASGNPA-----AGKPWHWKSPKPLVDP-RIHVNATPRIVGG
sp|P08246|ELNE_HUMAN   MTLGR--RLACL---FLACVLPALL----------------------LGGTALASEIVGG
sp|P20160|CAP7_HUMAN   MT-----RLTVL---ALLAGLLASS----------------------RAGSSPLLDIVGG
sp|P80015|CAP7_PIG     --------------------------------------------------------IVGG
sp|Q03238|GRAM_RAT     L--------------LLLLALKTLW----------------------AVGNRFEAQIIGG
sp|P00757|KLKB4_MOUSE  M---------W---F-LILFLALSL-------------------GGIDAAPPVQ----SQ
sp|Q6H321|KLK2_HORSE   M---------W---F-LVLCLDLSL-------------------GETGALPPIQSRIIGG
sp|Q91VE3|KLK7_MOUSE   M-------GVW---L-LSLITVLLS-------------------LAL-ETAGQGERIIDG
sp|Q9Y5K2|KLK4_HUMAN   MATA-GNPWGW---F-LG-YLILGV-------------------AGS-LVSGSCSQIING
sp|P29786|TRY3_AEDAE   M-N----QFLFVSF-CALLDSAKV-----SAA------------------TLSSGRIVGG
sp|P35037|TRY3_ANOGA   MIS----NKIAIL--LAVLVVAVAC-AQARVAQQHRSVQALPRFLP-RPKYDVGHRIVGG
sp|P07338|CTRB1_RAT    MAFLW----LVS---CFALVGATFGCGVPTI--Q--------------PVLTGLSRIVNG
                                                                                   

sp|O35205|GRAK_MOUSE   REVQPHSRPFMASIQY----RSKHICGGVLIHPQWVLTAAHCYSWFPRGHSPTVVLGAHS
sp|Q7YRZ7|GRAA_BOVIN   NEVAPHTRRYMALIK------GLKLCAGALIKENWVLTAAHCDLK----GNPQVILGAHS
sp|P08884|GRAE_MOUSE   HVVKPHSRPYMAFVKSVDIEGNRRYCGGFLVQDDFVLTAAHCRN-----RTMTVTLGAHN
sp|Q06606|GRZ2_RAT     TESKPHSRPYMAFIKFYDSNSEPHHCGGFLVAKDIVMTAAHCNG-----RNIKVTLGAHN
sp|P21844|MCPT5_MOUSE  TECIPHSRPYMAYLEIVTSENYLSACSGFLIRRNFVLTAAHCAG-----RSITVLLGAHN
sp|P03953|CFAD_MOUSE   QEAAAHARPYMASVQV----NGTHVCGGTLLDEQWVLSAAHCMDGVTDDDSVQVLLGAHS
sp|P00773|ELA1_RAT     AEARRNSWPSQISLQYLSGGSWYHTCGGTLIRRNWVMTAAHCVSSQ---MTFRVVVGDHN
sp|Q00871|CTRB1_PENVA  VEATPHSWPHQAALFID----DMYFCGGSLISSEWVLTAAHCMDGA---GFVEVVLGAHN
sp|P08246|ELNE_HUMAN   RRARPHAWPFMVSLQLR----GGHFCGATLIAPNFVMSAAHCVANV-NVRAVRVVLGAHN
sp|P20160|CAP7_HUMAN   RKARPRQFPFLASIQNQ----GRHFCGGALIHARFVMTAASCFQSQ-NPGVSTVVLGAYD
sp|P80015|CAP7_PIG     RRAQPQEFPFLASIQKQ----GRPFCAGALVHPRFVLTAASCFRGK-NSGSASVVLGAYD
sp|Q03238|GRAM_RAT     REAVPHSRPYMVSLQNT----KSHMCGGVLVHQKWVLTAAHCLSE--PLQQLKLVFGLHS
sp|P00757|KLKB4_MOUSE  V-DCENSQPWHVAVYR----FNKYQCGGVLLDRNWVLTAAHCYN-----DKYQVWLGKNN
sp|Q6H321|KLK2_HORSE   WECEKHSKPWQVAVYH----QGHFQCGGVLVHPQWVLTAAHCMS-----DDYQIWLGRHN
sp|Q91VE3|KLK7_MOUSE   YKCKEGSHPWQVALLK----GNQLHCGGVLVDKYWVLTAAHCKM-----GQYQVQLGSDK
sp|Q9Y5K2|KLK4_HUMAN   EDCSPHSQPWQAALVM----ENELFCSGVLVHPQWVLSAAHCFQ-----NSYTIGLGLHS
sp|P29786|TRY3_AEDAE   FQIDIAEVPHQVSLQRS----GRHFCGGSIISPRWVLTRAHCTTNT-DPAAYTIRAGSTD
sp|P35037|TRY3_ANOGA   FEIDVSETPYQVSLQYF----NSHRCGGSVLNSKWILTAAHCTVNL-QPSSLAVRLGSSR
sp|P07338|CTRB1_RAT    EDAIPGSWPWQVSLQDK---TGFHFCGGSLISEDWVVTAAHCGVKT----SDVVVAGEFD
                                    :           *.. ::    ::: * *           :  *   

sp|O35205|GRAK_MOUSE   LSKN-EP-MKQTFEIKKFIPFSRLQSGSA-----------SHDIMLIKLRTAAELNKNVQ
sp|Q7YRZ7|GRAA_BOVIN   TSHK-EK-LDQVFSIKKAIPYPCFDPQTF-----------EGDLQLLQLEGKATMTKAVG
sp|P08884|GRAE_MOUSE   IKAK-EE-TQQIIPVAKAIPHPDYNATAF-----------FSDIMLLKLESKAKRTKAVR
sp|Q06606|GRZ2_RAT     IKKQ-E--NTQVISVVKAKPHENYDRDSH-----------FNDIMLLKLERKAQLNGVVK
sp|P21844|MCPT5_MOUSE  KTSK-ED-TWQKLEVEKQFLHPKYDENLV-----------VHDIMLLKLKEKAKLTLGVG
sp|P03953|CFAD_MOUSE   LSAP-EP-YKRWYDVQSVVPHPGSRPDSL-----------EDDLILFKLSQNASLGPHVR
sp|P00773|ELA1_RAT     LSQN-DG-TEQYVSVQKIMVHPTWNSNNVAA---------GYDIALLRLAQSVTLNNYVQ
sp|Q00871|CTRB1_PENVA  IRQN-EA-SQVSITSTDFFTHENWNSWLL-----------TNDIALIRLPSPVSLNSNIK
sp|P08246|ELNE_HUMAN   LSRR-EP-TRQVFAVQR-IFENGYDPVNL-----------LNDIVILQLNGSATINANVQ
sp|P20160|CAP7_HUMAN   LRRR-ERQSRQTFSISS-MSENGYDPQQN-----------LNDLMLLQLDREANLTSSVT
sp|P80015|CAP7_PIG     LRQQ-EQ-SRQTFSIRS-ISQNGYDPRQN-----------LNDVLLLQLDREARLTPSVA
sp|Q03238|GRAM_RAT     LHDP-QD-PGLTFYIKQAIKHPGYNL-KY-----------ENDLALLKLDGRVKPSKNVK
sp|P00757|KLKB4_MOUSE  FLED-EP-SDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVK
sp|Q6H321|KLK2_HORSE   LSED-ED-TAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVK
sp|Q91VE3|KLK7_MOUSE   IGD---Q-SAQKIKATKSFRHPGYSTKT-----------HVNDIMLVRLDEPVKMSSKVE
sp|Q9Y5K2|KLK4_HUMAN   LEADQEP-GSQMVEASLSVRHPEYNRPL-----------LANDLMLIKLDESVSESDTIR
sp|P29786|TRY3_AEDAE   RT-----NGGIIVKVKSVIPHPQYNGDTY-----------NYDFSLLELDESIGFSRSIE
sp|P35037|TRY3_ANOGA   HA-----SGGTVVRVARVLEHPNYDDSTI-----------DYDFSLMELESELTFSDVVQ
sp|P07338|CTRB1_RAT    QGSD-EE-NIQVLKIAQVFKNPKFNMFTV-----------RNDITLLKLATPAQFSETVS
                                                                 *. :..*         : 

sp|O35205|GRAK_MOUSE   LLHLGSKN--YLRDGTKCQVTGWGTTKPDLLTASDTLREVTVTIISRKRCNSQSYYNHKP
sp|Q7YRZ7|GRAA_BOVIN   ILQLPRTE-DDVKPHTKCHVAGWGSTKKDACQMSNALREANVTVIDRKICNDAQHYNFNP
sp|P08884|GRAE_MOUSE   PLKLPRPN-ARVKPGDVCSVAGWGSRSINDTKASARLREAQLVIQEDEECKKRF----RH
sp|Q06606|GRZ2_RAT     TIALPRSQ-DWVKPGQVCTVAGWGRLANC--TSSNTLQEVNLEVQKGQKCQDMS----ED
sp|P21844|MCPT5_MOUSE  TLPLSANF-NFIPPGRMCRAVGWGRTNVNE-PASDTLQEVKMRLQEPQACKHF-----TS
sp|P03953|CFAD_MOUSE   PLPLQYED-KEVEPGTLCDVAGWGVVTHA-GRRPDVLHQLRVSIMNRTTCNLRTYH--DG
sp|P00773|ELA1_RAT     LAVLPQEG-TILANNNPCYITGWGRTRTN-GQLSQTLQQAYLPSVDYSICSSSSYW--GS
sp|Q00871|CTRB1_PENVA  TVKLPSSD-V--SVGTTVTPTGWGRPSDSASGISDVLRQVNVPVMTNADCDSVY-----G
sp|P08246|ELNE_HUMAN   VAQLPAQG-RRLGNGVQCLAMGWGLLGRN-RGIASVLQELNVTVVT-SLCRR--------
sp|P20160|CAP7_HUMAN   ILPLPLQN-ATVEAGTRCQVAGWGSQRSG-GRLSRFPRFVNVTVTPEDQCRP--------
sp|P80015|CAP7_PIG     LVPLPPQN-ATVEAGTNCQVAGWGTQRLR-RLFSRFPRVLNVTVTS-NPCLP--------
sp|Q03238|GRAM_RAT     PLALPRKPRDKPAEGSRCSTAGWGITHQR-GQLAKSLQELDLRLLDTRMCNNSRFW--NG
sp|P00757|KLKB4_MOUSE  PITLPTEE---PKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAH----EM
sp|Q6H321|KLK2_HORSE   ILDLPTQE---PKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARAY----PE
sp|Q91VE3|KLK7_MOUSE   AVQLPEHC---EPPGTSCTVSGWGTTTSPDVTFPSDLMCSDVKLISSRECKKVY----KD
sp|Q9Y5K2|KLK4_HUMAN   SISIASQC---PTAGNSCLVSGWGLLANG--RMPTVLQCVNVSVVSEEVCSKLY----DP
sp|P29786|TRY3_AEDAE   AIALPDAS-ETVADGAMCTVSGWGDTKNV-FEMNTLLRAVNVPSYNQAECAAALVNV--V
sp|P35037|TRY3_ANOGA   PVSLPDQD-EAVEDGTMTIVSGWGNTQSA-AESNAILRAANVPTVNQKECTIAYSSS--G
sp|P07338|CTRB1_RAT    AVCLPNVD-DDFPPGTVCATTGWGKTKYNALKTPEKLQQAALPIVSEADCKKSW----GS
                          :                 ***                 :       *          

sp|O35205|GRAK_MOUSE   VITKDMICAGDARGQKDSCKGDSGGPLICK--G--IFHALVSQGYK--CGIAKKPGIYTL
sp|Q7YRZ7|GRAA_BOVIN   VIDLSMICAGGRKGEDDSCEGDSGSPLICD--N--VFRGVTSFGK---CGNPQKPGIYIL
sp|P08884|GRAE_MOUSE   YTETTEICAGDLKKIKTPFKGDSGGPLVCD--N--KAYGLLAYAKN----RTISSGVFTK
sp|Q06606|GRZ2_RAT     YNDSIQLCVGNPSEGKATGKGDSGGPFVCD--G--VAQGIVSYRLC----TGTLPRVFTR
sp|P21844|MCPT5_MOUSE  FRHNSQLCVGNPKKMQNVYKGDSGGPLLCA--G--IAQGIASYVHR----NAKPPAVFTR
sp|P03953|CFAD_MOUSE   VVTINMMCAE--SNRRDTCRGDSGSPLVCG--D--AVEGVVTWGSR-VCGNGKKPGVYTR
sp|P00773|ELA1_RAT     TVKTTMVCAGG-DGVRSGCQGDSGGPLHCLVNGQYSVHGVTSFVSSMGCNVSKKPTVFTR
sp|Q00871|CTRB1_PENVA  IVGDGVVCIDG-TGGKSTCNGDSGGPLNLN--G--MTYGITSFGSS-AGCEKGYPAAFTR
sp|P08246|ELNE_HUMAN   ----SNVCTLVRGRQAGVCFGDSGSPLVCN--G--LIHGIASFVRG-GCASGLYPDAFAP
sp|P20160|CAP7_HUMAN   ----NNVCTGVLTRRGGICNGDGGTPLVCE--G--LAHGVASFSLG-PCG--RGPDFFTR
sp|P80015|CAP7_PIG     ----RDMCIGVFSRRGRISQGDRGTPLVCN--G--LAQGVASFLRR-RFR--RSSGFFTR
sp|Q03238|GRAM_RAT     VLTDSMLCLKAGAKGQAPCKGDSGGPLVCGK-G--KVDGILSFSSK-NCTDIFKPTVATA
sp|P00757|KLKB4_MOUSE  KVTDAMLCAGEMDGGSYTCEHDSGGPLICD--G--ILQGITSWGPE-PCGEPTEPSVYTK
sp|Q6H321|KLK2_HORSE   KMTEFVLCATHRDDSGSICLGDSGGALICD--G--VFQGITSWGYS-ECADFNDNFVFTK
sp|Q91VE3|KLK7_MOUSE   LLGKTMLCAGIPDSKTNTCNGDSGGPLVCN--D--TLQGLVSWGTY-PCGQPNDPGVYTQ
sp|Q9Y5K2|KLK4_HUMAN   LYHPSMFCAGGGQDQKDSCNGDSGGPLICN--G--YLQGLVSFGKA-PCGQVGVPGVYTN
sp|P29786|TRY3_AEDAE   PVTEQMICAGYAAGGKDSCQGDSGGPLVSG--D--KLVGVVSWGKG--CALPNLPGVYAR
sp|P35037|TRY3_ANOGA   GITDRMLCAGYKRGGKDACQGDSGGPLVVD--G--KLVGVVSWGFG--CAMPGYPGVYAR
sp|P07338|CTRB1_RAT    KITDVMTCAG--ASGVSSCMGDSGGPLVCQKDGVWTLAGIVSWGSG-VCST-STPAVYSR
                              *             * * .:     .     .: :                  

sp|O35205|GRAK_MOUSE   LTKKYQTWIKSKLAPSR---------------AH
sp|Q7YRZ7|GRAA_BOVIN   LTKKHLNWIKKTIAGA-----------------I
sp|P08884|GRAE_MOUSE   IV-HFLPWISRNMKLL------------------
sp|Q06606|GRZ2_RAT     IS-SFIPWIQKTMKVLQ---------------QS
sp|P21844|MCPT5_MOUSE  IS-HYRPWINKILREN------------------
sp|P03953|CFAD_MOUSE   VS-SYRMWIENITNGNM---------------TS
sp|P00773|ELA1_RAT     VS-AYISWMNNVIAY------------------T
sp|Q00871|CTRB1_PENVA  VY-YYLDWIQQKTGVT-----------------P
sp|P08246|ELNE_HUMAN   VA-QFVNWIDSIIQRSEDNPCPHPRDPDPASRTH
sp|P20160|CAP7_HUMAN   VA-LFRDWIDGVLNNPGPG-------------PA
sp|P80015|CAP7_PIG     VA-LFRNWIDSVLNNP-----------------P
sp|Q03238|GRAM_RAT     VA-PYSSWIRKVIGRWSPQP------------LT
sp|P00757|KLKB4_MOUSE  LI-KFSSWIRETMANN-----------------P
sp|Q6H321|KLK2_HORSE   VM-PHLKWIKETIEKN-----------------S
sp|Q91VE3|KLK7_MOUSE   VC-KYKRWVMETMKTH-----------------R
sp|Q9Y5K2|KLK4_HUMAN   LC-KFTEWIEKTVQA------------------S
sp|P29786|TRY3_AEDAE   VS-TVRQWIREVSEV-------------------
sp|P35037|TRY3_ANOGA   VA-VVRDWVRENSGA-------------------
sp|P07338|CTRB1_RAT    VT-ALMPWVQQILEAN------------------
                       :      *: