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/*
Theseus - maximum likelihood superpositioning of macromolecular structures
Copyright (C) 2004-2015 Douglas L. Theobald
This file is part of THESEUS.
THESEUS is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as
published by the Free Software Foundation, either version 3 of
the License, or (at your option) any later version.
THESEUS is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public
License along with THESEUS in the file 'COPYING'. If not, see
<http://www.gnu.org/licenses/>.
-/_|:|_|_\-
*/
#ifndef PROCGSLSVD_SEEN
#define PROCGSLSVD_SEEN
#include "FragCds.h"
double
ProcGSLSVDvan(const Cds *cds1, const Cds *cds2, double **rotmat,
double **Rmat, double **Umat, double **VTmat, double *sigma);
double
ProcGSLSVDvan2(const double **cds1, const double **cds2, const int len, double **rotmat,
double **Rmat, double **Umat, double **VTmat, double *sigma,
double *norm1, double *norm2, double *innprod);
double
ProcGSLSVDFrag(const FragCds *frag1, const FragCds *frag2, double **rotmat,
double **Rmat, double **Umat, double **VTmat, double *sigma);
double
ProcGSLSVD(const Cds *cds1, const Cds *cds2, double **rotmat, const double *weights,
double **Rmat, double **Umat, double **VTmat, double *sigma);
double
ProcGSLSVDCov(Cds *cds1, Cds *cds2, double **rotmat, const double **covmat,
double **Rmat, double **Umat, double **VTmat,
double *sigma);
#endif
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