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Source: thesias
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Dylan Aïssi <daissi@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
default-jdk
Standards-Version: 4.7.0
Rules-Requires-Root: no
Vcs-Browser: https://salsa.debian.org/med-team/thesias
Vcs-Git: https://salsa.debian.org/med-team/thesias.git
Homepage: https://github.com/daissi/thesias
Package: thesias
Architecture: any
Depends: ${misc:Depends},
${shlibs:Depends},
default-jre
Description: Testing Haplotype Effects In Association Studies
The objectif of the THESIAS program is to performed haplotype-based
association analysis in unrelated individuals. This program is based
on the maximum likelihood model described in Tregouet et al. 2002
(Hum Mol Genet 2002,11: 2015-2023) and is linked to the SEM algorithm
(Tregouet et al. Ann Hum Genet 2004,68: 165-177).
THESIAS allows one to simultaneous estimate haplotype frequencies
and their associate effects on the phenotype of interest.
In this new THESIAS release, quantitative, qualitative (logistic
and matched-pair analysis), categorical and survival outcomes can be
studied. X-linked haplotype analysis is also feasible.
Covariate-adjusted haplotype effects as well as haplotype x covariate
interactions can also be investigated.
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