File: input_data.cpp

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tiledarray 1.0.0-1
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/*
 * This file is a part of TiledArray.
 * Copyright (C) 2013  Virginia Tech
 *
 *  This program is free software: you can redistribute it and/or modify
 *  it under the terms of the GNU General Public License as published by
 *  the Free Software Foundation, either version 3 of the License, or
 *   (at your option) any later version.
 *
 *  This program is distributed in the hope that it will be useful,
 *  but WITHOUT ANY WARRANTY; without even the implied warranty of
 *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 *  GNU General Public License for more details.
 *
 *  You should have received a copy of the GNU General Public License
 *  along with this program.  If not, see <http://www.gnu.org/licenses/>.
 *
 */

#include "input_data.h"
#include <fstream>
#include <sstream>

TiledArray::TiledRange1 InputData::make_trange1(
    const obs_mosym::const_iterator& begin, obs_mosym::const_iterator first,
    obs_mosym::const_iterator last) {
  std::vector<std::size_t> tiles;
  obs_mosym::value_type current = *first;
  tiles.push_back(std::distance(begin, first));

  for (; first != last; ++first) {
    if (*first != current) {
      tiles.push_back(std::distance(begin, first));
      current = *first;
    }
  }

  tiles.push_back(std::distance(begin, first));

  return TiledArray::TiledRange1(tiles.begin(), tiles.end());
}

TiledArray::TSpArrayD::trange_type InputData::trange(const Spin s,
                                                     const RangeOV ov1,
                                                     const RangeOV ov2) const {
  const obs_mosym& spin = (s == alpha ? obs_mosym_alpha_ : obs_mosym_beta_);
  const std::size_t nocc = (s == alpha ? nocc_act_alpha_ : nocc_act_beta_);
  const std::size_t first1 = (ov1 == occ ? 0 : nocc);
  const std::size_t last1 = (ov1 == occ ? nocc : nmo_);
  const std::size_t first2 = (ov2 == occ ? 0 : nocc);
  const std::size_t last2 = (ov2 == occ ? nocc : nmo_);

  const std::array<TiledArray::TiledRange1, 2> tr_list = {
      {make_trange1(spin.begin(), spin.begin() + first1, spin.begin() + last1),
       make_trange1(spin.begin(), spin.begin() + first2,
                    spin.begin() + last2)}};

  return TiledArray::TiledRange(tr_list.begin(), tr_list.end());
}

TiledArray::TSpArrayD::trange_type InputData::trange(
    const Spin s1, const Spin s2, const RangeOV ov1, const RangeOV ov2,
    const RangeOV ov3, const RangeOV ov4) const {
  const obs_mosym& spin1 = (s1 == alpha ? obs_mosym_alpha_ : obs_mosym_beta_);
  const std::size_t& nocc1 = (s1 == alpha ? nocc_act_alpha_ : nocc_act_beta_);
  const obs_mosym& spin2 = (s2 == alpha ? obs_mosym_alpha_ : obs_mosym_beta_);
  const std::size_t& nocc2 = (s2 == alpha ? nocc_act_alpha_ : nocc_act_beta_);
  const std::size_t first1 = (ov1 == occ ? 0 : nocc1);
  const std::size_t last1 = (ov1 == occ ? nocc1 : nmo_);
  const std::size_t first2 = (ov2 == occ ? 0 : nocc2);
  const std::size_t last2 = (ov2 == occ ? nocc2 : nmo_);
  const std::size_t first3 = (ov3 == occ ? 0 : nocc1);
  const std::size_t last3 = (ov3 == occ ? nocc1 : nmo_);
  const std::size_t first4 = (ov4 == occ ? 0 : nocc2);
  const std::size_t last4 = (ov4 == occ ? nocc2 : nmo_);

  const std::array<TiledArray::TiledRange1, 4> tr_list = {
      {make_trange1(spin1.begin(), spin1.begin() + first1,
                    spin1.begin() + last1),
       make_trange1(spin2.begin(), spin2.begin() + first2,
                    spin2.begin() + last2),
       make_trange1(spin1.begin(), spin1.begin() + first3,
                    spin1.begin() + last3),
       make_trange1(spin2.begin(), spin2.begin() + first4,
                    spin2.begin() + last4)}};

  return TiledArray::TiledRange(tr_list.begin(), tr_list.end());
}

InputData::InputData(std::ifstream& input) {
  std::string label;
  input >> label >> name_;
  //  std::cout << label << name_ << "\n";
  input >> label >> nirreps_;
  //  std::cout << label << " " << nirreps_ << "\n";
  input >> label >> nmo_;
  //  std::cout << label << " " << nmo_ << "\n";
  input >> label >> nocc_act_alpha_;
  //  std::cout << label << " " << nocc_act_alpha_ << "\n";
  input >> label >> nocc_act_beta_;
  //  std::cout << label << " " << nocc_act_beta_ << "\n";
  input >> label >> nvir_act_alpha_;
  //  std::cout << label << " " << nvir_act_alpha_ << "\n";
  input >> label >> nvir_act_beta_;
  //  std::cout << label << " " << nvir_act_beta_ << "\n";
  input >> label;
  //  std::cout << label << "\n";
  obs_mosym_alpha_.resize(nmo_, 0);
  for (obs_mosym::iterator it = obs_mosym_alpha_.begin();
       it != obs_mosym_alpha_.end(); ++it) {
    input >> *it;
    //    std::cout << *it << "\n";
  }
  input >> label;
  //  std::cout << label << "\n";
  obs_mosym_beta_.resize(nmo_, 0);
  for (obs_mosym::iterator it = obs_mosym_beta_.begin();
       it != obs_mosym_beta_.end(); ++it) {
    input >> *it;
    //    std::cout << *it << "\n";
  }
  std::string line;
  std::getline(input, line);
  std::getline(input, line);
  do {
    line.clear();
    std::getline(input, line);
    if (line.size() == 0ul) break;
    std::istringstream iss(line);
    array2d::value_type data;
    iss >> data.first[0] >> data.first[1] >> data.second;
    f_.push_back(data);
    //      std::cout << "(" << data.first[0] << ", " << data.first[1] << ") "
    //      << data.second << "\n";
  } while (!input.eof());
  do {
    line.clear();
    std::getline(input, line);
    if (line.size() == 0ul) break;
    std::istringstream iss(line);
    array4d::value_type data;

    // Note: Input data is in chemist notation order, but we want physicist
    // notation. So we swap index 1 and 2
    iss >> data.first[0] >> data.first[2] >> data.first[1] >> data.first[3] >>
        data.second;
    v_ab_.push_back(data);
    //      std::cout << "(" << data.first[0] << ", " << data.first[1] << ", "
    //      << data.first[2]
    //          << ", " << data.first[3] << ") " << data.second << "\n";
  } while (!input.eof());
}

TiledArray::TSpArrayD InputData::make_f(TiledArray::World& w, const Spin s,
                                        const RangeOV ov1, const RangeOV ov2) {
  // Construct the array
  TiledArray::TiledRange tr = trange(s, ov1, ov2);
  //  std::cout << tr << "\n";

  TiledArray::TSpArrayD f(w, tr, make_sparse_shape(tr, f_));

  // Initialize tiles
  f.fill(0.0);

  // Set the tile data
  TiledArray::TSpArrayD::range_type::index index;
  for (array2d::const_iterator it = f_.begin(); it != f_.end(); ++it) {
    if (f.trange().elements_range().includes(it->first)) {
      index = f.trange().element_to_tile(it->first);
      if (f.is_local(index)) f.find(index).get()[it->first] = it->second;
    }
  }

  return f;
}

TiledArray::TSpArrayD InputData::make_v_ab(TiledArray::World& w,
                                           const RangeOV ov1, const RangeOV ov2,
                                           const RangeOV ov3,
                                           const RangeOV ov4) {
  // Construct the array
  TiledArray::TiledRange tr = trange(alpha, beta, ov1, ov2, ov3, ov4);
  //  std::cout << tr << "\n";
  TiledArray::TSpArrayD v_ab(w, tr, make_sparse_shape(tr, v_ab_));

  // Initialize tiles
  v_ab.fill(0.0);

  // Set the tile data
  TiledArray::TSpArrayD::range_type::index index;
  for (array4d::const_iterator it = v_ab_.begin(); it != v_ab_.end(); ++it) {
    if (v_ab.trange().elements_range().includes(it->first)) {
      index = v_ab.trange().element_to_tile(it->first);
      if (v_ab.is_local(index)) v_ab.find(index).get()[it->first] = it->second;
    }
  }

  return v_ab;
}