File: morph.c

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// Copyright (c) 2015, UChicago Argonne, LLC. All rights reserved.

// Copyright 2015. UChicago Argonne, LLC. This software was produced
// under U.S. Government contract DE-AC02-06CH11357 for Argonne National
// Laboratory (ANL), which is operated by UChicago Argonne, LLC for the
// U.S. Department of Energy. The U.S. Government has rights to use,
// reproduce, and distribute this software.  NEITHER THE GOVERNMENT NOR
// UChicago Argonne, LLC MAKES ANY WARRANTY, EXPRESS OR IMPLIED, OR
// ASSUMES ANY LIABILITY FOR THE USE OF THIS SOFTWARE.  If software is
// modified to produce derivative works, such modified software should
// be clearly marked, so as not to confuse it with the version available
// from ANL.

// Additionally, redistribution and use in source and binary forms, with
// or without modification, are permitted provided that the following
// conditions are met:

//     * Redistributions of source code must retain the above copyright
//       notice, this list of conditions and the following disclaimer.

//     * Redistributions in binary form must reproduce the above copyright
//       notice, this list of conditions and the following disclaimer in
//       the documentation and/or other materials provided with the
//       distribution.

//     * Neither the name of UChicago Argonne, LLC, Argonne National
//       Laboratory, ANL, the U.S. Government, nor the names of its
//       contributors may be used to endorse or promote products derived
//       from this software without specific prior written permission.

// THIS SOFTWARE IS PROVIDED BY UChicago Argonne, LLC AND CONTRIBUTORS
// "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
// LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS
// FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL UChicago
// Argonne, LLC OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT,
// INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING,
// BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
// LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
// CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
// LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN
// ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
// POSSIBILITY OF SUCH DAMAGE.

#include <assert.h>
#include <limits.h>
#include <math.h>

#include "libtomo/morph.h"

DLL void
downsample(const float* data, int dx, int dy, int dz, int level, int axis, float* out)
{
    unsigned           m, n, p, binsize;
    unsigned long long i, j, k, ind;

    binsize = pow(2, level);
    // Ensure that largest array is small enough to be indexable
    assert(ULLONG_MAX / dx / dy / dz > 0);
    // Ensure safe comparison between unsigned (ijk) and signed (xyz)
    assert(dx >= 0 && dy >= 0 && dz >= 0);

    if(axis == 0)
    {
        dx /= binsize;
        for(m = 0, ind = 0; m < (unsigned) dx; m++)
        {
            i = m * (dy * dz);
            for(p = 0; p < binsize; p++)
            {
                for(n = 0; n < (unsigned) dy; n++)
                {
                    j = n * dz;
                    for(k = 0; k < (unsigned) dz; k++)
                    {
                        out[i + j + k] += data[ind] / binsize;
                        ind++;
                    }
                }
            }
        }
    }
    else if(axis == 1)
    {
        dy /= binsize;
        for(m = 0, ind = 0; m < (unsigned) dx; m++)
        {
            i = m * (dy * dz);
            for(n = 0; n < (unsigned) dy; n++)
            {
                j = n * dz;
                for(p = 0; p < binsize; p++)
                {
                    for(k = 0; k < (unsigned) dz; k++)
                    {
                        out[i + j + k] += data[ind] / binsize;
                        ind++;
                    }
                }
            }
        }
    }
    else if(axis == 2)
    {
        dz /= binsize;
        for(m = 0, ind = 0; m < (unsigned) dx; m++)
        {
            i = m * (dy * dz);
            for(n = 0; n < (unsigned) dy; n++)
            {
                j = n * dz;
                for(k = 0; k < (unsigned) dz; k++)
                {
                    for(p = 0; p < binsize; p++)
                    {
                        out[i + j + k] += data[ind] / binsize;
                        ind++;
                    }
                }
            }
        }
    }
}

DLL void
upsample(const float* data, int dx, int dy, int dz, int level, int axis, float* out)
{
    unsigned           m, n, p, binsize;
    unsigned long long k, i, j, ind;

    binsize = pow(2, level);
    // Ensure that largest array is small enough to be indexable
    assert(ULLONG_MAX / binsize / dy / dz / dx > 0);
    // Ensure safe comparison between unsigned (ijk) and signed (xyz)
    assert(dx >= 0 && dy >= 0 && dz >= 0);

    if(axis == 0)
    {
        for(m = 0, ind = 0; m < (unsigned) dx; m++)
        {
            i = m * (dy * dz);
            for(p = 0; p < binsize; p++)
            {
                for(n = 0; n < (unsigned) dy; n++)
                {
                    j = n * dz;
                    for(k = 0; k < (unsigned) dz; k++)
                    {
                        out[ind] = data[i + j + k];
                        ind++;
                    }
                }
            }
        }
    }
    else if(axis == 1)
    {
        for(m = 0, ind = 0; m < (unsigned) dx; m++)
        {
            i = m * (dy * dz);
            for(n = 0; n < (unsigned) dy; n++)
            {
                j = n * dz;
                for(p = 0; p < binsize; p++)
                {
                    for(k = 0; k < (unsigned) dz; k++)
                    {
                        out[ind] = data[i + j + k];
                        ind++;
                    }
                }
            }
        }
    }
    else if(axis == 2)
    {
        for(m = 0, ind = 0; m < (unsigned) dx; m++)
        {
            i = m * (dy * dz);
            for(n = 0; n < (unsigned) dy; n++)
            {
                j = n * dz;
                for(k = 0; k < (unsigned) dz; k++)
                {
                    for(p = 0; p < binsize; p++)
                    {
                        out[ind] = data[i + j + k];
                        ind++;
                    }
                }
            }
        }
    }
}

DLL void
sample(int mode, const float* data, int dx, int dy, int dz, int level, int axis,
       float* out)
{
    if(mode == 0)
    {
        downsample(data, dx, dy, dz, level, axis, out);
    }

    else if(mode == 1)
    {
        upsample(data, dx, dy, dz, level, axis, out);
    }
}