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Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: TopHat
Upstream-Contact: Daehwan Kim <infphilo@gmail.com>
Source: http://ccb.jhu.edu/software/tophat/downloads/tophat-2.0.12.tar.gz
Comment:
Cole Trapnell wrote TopHat. TopHat is built on Bowtie, which was written by
Ben Langmead and Cole Trapnell. Daehwan Kim and Geo Pertea added support
for SOLiD reads.
Files-Excluded:
*/src/SeqAn*
Files: *
Copyright: © 2003-2010 Cole Trapnell et al
License: Artistic
Files: ax_boost_thread.m4
Copyright: © 2009 Thomas Porschberg <thomas@randspringer.de>
© 2009 Michael Tindal
License: GAP
Files: ax_boost_base.m4
Copyright: © 2009 Thomas Porschberg <thomas@randspringer.de>
License: GAP
Files: aclocal.m4
Copyright: © 1996-2005 Free Software Foundation, Inc.
License: M4-free
This file is free software; the Free Software Foundation
gives unlimited permission to copy and/or distribute it,
with or without modifications, as long as this notice is preserved.
Files: INSTALL configure
Copyright: © 1992-2010 Free Software Foundation, Inc.
License: autobuild-free
This configure script is free software; the Free Software Foundation
gives unlimited permission to copy, distribute and modify it.
Files: debian/*
Copyright: © 2011 Carlos Borroto <carlos.borroto@gmail.com>
© 2014 Alex Mestiashvili <alex@biotec.tu-dresden.de>
License: GPL-2+
License: GAP
Copying and distribution of this file, with or without modification, are
permitted in any medium without royalty provided the copyright notice
and this notice are preserved.
License: Artistic
This program is free software; you can redistribute it and/or modify
it under the terms of the Artistic License, which comes with Perl.
.
On Debian systems, the complete text of the Artistic License can be
found in `/usr/share/common-licenses/Artistic'.
License: GPL-2+
This package is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
.
This package is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
.
You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>
.
On Debian systems, the complete text of the GNU General
Public License version 2 can be found in "/usr/share/common-licenses/GPL-2".
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