1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
|
Version 1.8.0 (October 1, 2025)
* TopDIA: Add TopDIA
Version 1.7.0 (December 1, 2023)
* TopFD: Added new functions and machine learning models for proteoform feature detection and evaluation in LC-MS or CE-MS data.
Version 1.6.0 (December 1, 2022)
* TopPIC: Added support for variable PTMs
* TopPIC: Rewrote protein sequence filtering methods
Version 1.5.0 (November 30, 2021)
* TopFD: Added support for FAIMS data
* TopPIC: Rewrote the localization function
Version 1.4.0 (December 30, 2020)
* TopFD: Added multiple thread support for TopFD
* TopIndex: Added TopIndex
Version 1.3.0 (December 31, 2019)
* TopPIC: Added spectral visualization using Html files.
* TopMG: Added spectral visualization using Html files.
* TopDiff: Added TopDiff.
Version 1.2.0 (November 15, 2018)
* TopFD: Added support for processing multiple files
* TopFD: Optimized the code to speed up computation
* TopPIC: Added support for data containing multiple fractions
* TopMG: Added TopMG
Version 1.1.0 (November 15, 2017)
* TopFD: Added TopFD
* TopFD: Added a GUI wrapper topfd_gui
* TopPIC: Added a filtering method based on proteoform-level FDR
* TopPIC: Added a GUI wrapper toppic_gui
Version 1.0.0 (May 26, 2016)
* TopPIC: Added the support for spectral pairs or triplets generated by the alternating fragmentation mode
* TopPIC: Optimized the algorithms for protein filtering and spectral alignment
* TopPIC: Added the MIScore method for mass shift characterization
Version 0.9.0 (December 8, 2014)
* TopPIC: First release
|
