File: Makefile

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transdecoder 3.0.1%2Bdfsg-1
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SHELL := /bin/bash

all:
	cd ./transdecoder_plugins/ && $(MAKE) all

clean:
	cd ./transdecoder_plugins/ && $(MAKE) clean
	cd ./sample_data && ./cleanme.pl

test:
	cd sample_data/cufflinks_example && ./runMe.sh
	cd sample_data/pasa_example && ./runMe.sh
	cd sample_data/simple_transcriptome_target && ./runMe.sh