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#!/usr/bin/make -f
DH_VERBOSE := 1
include /usr/share/dpkg/default.mk
%:
dh $@
override_dh_auto_clean:
cd ./sample_data && for script in ./*/cleanme.pl; do $$($$script); done
override_dh_auto_build:
override_dh_auto_test:
ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
dh_auto_test
cd ./sample_data && for script in ./*/cleanme.pl; do $$($$script); done
endif
override_dh_install:
dh_install
find debian/transdecoder -name '*.p?' | xargs sed -i \
's=^#!/usr/local/bin/perl=#!/usr/bin/perl='
find debian/*/usr/lib/transdecoder -type d -empty -delete
override_dh_installman:
pod2man --section=1 --center="Transcriptome Protein Prediction" \
--release="$(DEB_VERSION_UPSTREAM)" TransDecoder.LongOrfs > \
debian/TransDecoder.LongOrfs.1
pod2man --section=1 --center="Transcriptome Protein Prediction" \
--release="$(DEB_VERSION_UPSTREAM)" TransDecoder.Predict > \
debian/TransDecoder.Predict.1
dh_installman
override_dh_fixperms:
dh_fixperms
chmod -x debian/transdecoder/usr/lib/transdecoder/PerlLib/Fasta_retriever.pm
find debian -name Process_cmd.pm -exec chmod -x \{\} \;
override_dh_clean:
# generated man pages
dh_clean debian/TransDecoder.LongOrfs.1 debian/TransDecoder.Predict.1
override_dh_installdocs:
dh_installdocs
for pl in `grep -Rl '#![[:space:]]*/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \
sed -i '1s?^#![[:space:]]*/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' $${pl} ; \
done
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