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transdecoder (5.7.1-2) unstable; urgency=medium
* d/tests/control: skip tests when hmmer is not available on that
architecture.
-- Michael R. Crusoe <crusoe@debian.org> Thu, 14 Sep 2023 12:37:41 +0200
transdecoder (5.7.1-1) unstable; urgency=medium
* d/watch: update to new tag format.
* New upstream version
* Standards-Version: 4.6.2 (routine-update)
* Set upstream metadata fields: Bug-Database, Bug-Submit.
* d/patches: drop fix-whatis and reproducible-sample_data.patch.
* d/patches/no_sudo: don't use sudo during clean operation
* d/patches/2to2: forward upstream
* d/control, d/tests/control: add ncbi-blast+ for makeblastdb
hmmer for hmmpress,
r-base-core, r-cran-ggplot2, r-bioc-seqlogo
* d/patches/test_path.patch: fix some test paths.
* d/transdecoder-docs.docs: new readme name.
* upstream no longer used POD, so drop the pod2man usage.
-- Michael R. Crusoe <crusoe@debian.org> Wed, 13 Sep 2023 22:54:52 +0200
transdecoder (5.0.1-5) unstable; urgency=medium
* Team upload.
* d/control: Suggests: transdecoder-doc.
Thanks to Andreas Beckmann <anbe@debian.org> (Closes: #988852)
-- Étienne Mollier <emollier@debian.org> Mon, 13 Dec 2021 21:25:21 +0100
transdecoder (5.0.1-4) unstable; urgency=medium
* Fix watchfile to detect new versions on github (routine-update)
* Standards-Version: 4.6.0 (routine-update)
* debhelper-compat 13 (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Replace use of deprecated $ADTTMP with $AUTOPKGTEST_TMP.
-- Andreas Tille <tille@debian.org> Sun, 29 Aug 2021 18:01:57 +0200
transdecoder (5.0.1-3) unstable; urgency=medium
* Use 2to3 to port from Python2 to Python3
Closes: #945719
* debhelper-compat 12
* Standards-Version: 4.4.1
* Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
Repository-Browse.
-- Andreas Tille <tille@debian.org> Fri, 10 Jan 2020 12:04:54 +0100
transdecoder (5.0.1-2) unstable; urgency=medium
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.2.1
* Respect DEB_BUILD_OPTIONS in override_dh_auto_test target
* Remove trailing whitespace in debian/changelog
* Remove trailing whitespace in debian/copyright
* Fix Perl path
-- Andreas Tille <tille@debian.org> Tue, 30 Oct 2018 14:25:40 +0100
transdecoder (5.0.1-1) unstable; urgency=medium
* New upstream version (no need to repackage since binary files are now
removed upstream)
* Upstream changelog: cdhit has been removed and replaced by our own fast
method for removing redundancies
* Standards-Version: 4.1.3
* debhelper 11
* Add missing Depends: r-base-core, python
* d/rules: do not parse d/changelog
* Fix permissions
-- Andreas Tille <tille@debian.org> Mon, 19 Feb 2018 15:11:06 +0100
transdecoder (3.0.1+dfsg-1) unstable; urgency=medium
* Add Multi-Arch: foreign hint to transdecoder-doc
* New upstream release
-- Michael R. Crusoe <michael.crusoe@gmail.com> Thu, 10 Nov 2016 03:21:20 -0800
transdecoder (3.0.0+dfsg-3) unstable; urgency=medium
* Apply fix for FTBFS from Chris Lamb <lamby@debian.org>, (Closes:
#839297)
* Fix running of autopkgtests
-- Michael R. Crusoe <michael.crusoe@gmail.com> Sun, 02 Oct 2016 06:31:59 -0700
transdecoder (3.0.0+dfsg-2) unstable; urgency=medium
[ Andreas Tille ]
* Use xz compression for repackaged tarball
* Simplify overrides
* Delete unneeded empty directory
* Fix permission of some file that should not be executable
[ Michael R. Crusoe ]
* clean up after tests to improve reproducibility and reduce package size
-- Michael R. Crusoe <michael.crusoe@gmail.com> Mon, 23 May 2016 12:46:27 -0700
transdecoder (3.0.0+dfsg-1) unstable; urgency=medium
* new upstream release
-- Michael R. Crusoe <michael.crusoe@gmail.com> Wed, 18 May 2016 03:03:30 -0700
transdecoder (2.1.0+dfsg-1) unstable; urgency=medium
* New upstream release
* Drop 'reproducible-build' patch, incorprorated upstream
-- Michael R. Crusoe <michael.crusoe@gmail.com> Wed, 18 May 2016 02:28:29 -0700
transdecoder (2.0.1+dfsg-3) unstable; urgency=medium
[ Eduard Sanou ]
* Set a hash seed for Perl before generating sample_data/transcripts.fasta
to get a reproducible output. Closes: #822268
[ Michael R. Crusoe ]
* Updated VCS URLs, bumped standards version, forwarded Eduard's patch
upstream.
-- Michael R. Crusoe <michael.crusoe@gmail.com> Sun, 24 Apr 2016 11:53:12 -0700
transdecoder (2.0.1+dfsg-2) unstable; urgency=medium
[ Andreas Tille ]
* Slightly enhanced short description
* Lintian override for false positive package-contains-timestamped-gzip
* DEP3 headers
[ Charles Plessy ]
* Make output reproducible.
Closes: #809187
-- Andreas Tille <tille@debian.org> Mon, 28 Dec 2015 08:26:27 +0100
transdecoder (2.0.1+dfsg-1) unstable; urgency=low
* Initial release (Closes: #778300)
-- Michael R. Crusoe <mcrusoe@msu.edu> Fri, 13 Feb 2015 06:26:24 -0500
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