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.. (parent) |
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d |
rwxr-xr-x |
4,096 |
PWM
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d |
rwxr-xr-x |
137 |
__pwm_tests
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d |
rwxr-xr-x |
28 |
bin
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d |
rwxr-xr-x |
4,096 |
misc
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rwxr-xr-x |
12,897 |
cdna_alignment_orf_to_genome_orf.pl
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rwxr-xr-x |
1,373 |
compute_base_probs.pl
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rwxr-xr-x |
3,487 |
exclude_similar_proteins.pl
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995 |
fasta_prot_checker.pl
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rwxr-xr-x |
1,012 |
ffindex_resume.pl
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rwxr-xr-x |
794 |
gene_list_to_gff.pl
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- |
rwxr-xr-x |
646 |
get_FL_accs.pl
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rwxr-xr-x |
1,329 |
get_longest_ORF_per_transcript.pl
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rwxr-xr-x |
969 |
get_top_longest_fasta_entries.pl
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903 |
gff3_file_to_bed.pl
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rwxr-xr-x |
4,725 |
gff3_file_to_proteins.pl
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rwxr-xr-x |
1,836 |
gff3_gene_to_gtf_format.pl
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rwxr-xr-x |
2,528 |
gtf_genome_to_cdna_fasta.pl
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rwxr-xr-x |
2,178 |
gtf_to_alignment_gff3.pl
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rwxr-xr-x |
2,023 |
gtf_to_bed.pl
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rwxr-xr-x |
1,639 |
nr_ORFs_gff3.pl
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rwxr-xr-x |
950 |
pfam_mpi.pbs
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rwxr-xr-x |
9,248 |
pfam_runner.pl
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rwxr-xr-x |
1,028 |
refine_gff3_group_iso_strip_utrs.pl
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rwxr-xr-x |
1,868 |
refine_hexamer_scores.pl
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rwxr-xr-x |
2,511 |
remove_eclipsed_ORFs.pl
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rwxr-xr-x |
3,179 |
score_CDS_likelihood_all_6_frames.pl
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rwxr-xr-x |
11,624 |
select_best_ORFs_per_transcript.pl
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rwxr-xr-x |
3,888 |
seq_n_baseprobs_to_loglikelihood_vals.pl
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rwxr-xr-x |
10,032 |
start_codon_refinement.pl
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rwxr-xr-x |
4,267 |
train_start_PWM.pl
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rwxr-xr-x |
116 |
uri_unescape.pl
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