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#
# Makefile.am
#
#
# Part of TREE-PUZZLE 5.2 (February 2005)
#
# (c) 2003-2005 by Heiko A. Schmidt, Korbinian Strimmer, and Arndt von Haeseler
# (c) 1999-2003 by Heiko A. Schmidt, Korbinian Strimmer,
# M. Vingron, and Arndt von Haeseler
# (c) 1995-1999 by Korbinian Strimmer and Arndt von Haeseler
#
# All parts of the source except where indicated are distributed under
# the GNU public licence. See http://www.opensource.org for details.
#
# ($Id$)
#
# Be sure to reexport important environment variables.
TESTS_ENVIRONMENT = MAKE="$(MAKE)" CC="$(CC)" CFLAGS="$(CFLAGS)" \
CPPFLAGS="$(CPPFLAGS)" LD="$(LD)" LDFLAGS="$(LDFLAGS)" \
LIBS="$(LIBS)" LN_S="$(LN_S)" NM="$(NM)" RANLIB="$(RANLIB)" \
EXEEXT="$(EXEEXT)" PACKAGE="$(PACKAGE)" VERSION="$(VERSION)"
TESTFILES = \
qp-pure-bin.test\
qp-pure-nucl.test\
qp-tn-nucl.test\
qp-hky-clock-nucl.test\
qp-hky-rhet-nucl.test\
qp-hky-rhet-clock-nucl.test\
qp-pure-prot.test\
qp-mtrev-prot.test\
qp-vt-prot.test\
qp-wag-prot.test\
qp-clock.test\
qp-jtt-prot.test\
qp-jtt-rhet-prot.test\
qp-jtt-rhet-clock-prot.test\
lm-pure-prot.test\
ut-pure-prot.test\
cons-pure-prot.test
TESTS =\
build-puzzle\
$(TESTFILES)\
build-remark
EXTRA_DIST = generate-scripts.sh template-test build-puzzle build-remark \
$(TESTFILES)\
check-qp-pure-bin\
check-qp-pure-nucl\
check-qp-tn-nucl\
check-qp-hky-clock-nucl\
check-qp-hky-rhet-nucl\
check-qp-hky-rhet-clock-nucl\
check-qp-pure-prot\
check-qp-jtt-prot\
check-qp-mtrev-prot\
check-qp-vt-prot\
check-qp-wag-prot\
check-qp-clock\
check-qp-jtt-rhet-prot\
check-qp-jtt-rhet-clock-prot\
check-lm-pure-prot\
check-ut-pure-prot\
check-cons-pure-prot
build-puzzle: $(top_builddir)/src/puzzle
build-remark:
$(top_builddir)/src/puzzle:
cd $(top_builddir) && $(MAKE) all
generate:
VERSION="$(VERSION)"; export VERSION; \
if test -x generate-scripts.sh -a -f template-test; then \
echo "generating test scripts:"; \
./generate-scripts.sh; \
fi; \
echo "generating check files:"; \
for testprog in $(TESTS); do \
if test -x ./$$testprog ; then \
./$$testprog -g; \
fi; \
done
clean:
rm -f *.nucl.* *.prot.* *.bin.* *.trees.* *.ctrees.*
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