1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
|
#!/bin/sh
# ----------------------------------------------------------------------------
# Generic script for building Trilinos and Sundance on Linux machines with
# configurations similar to gibbon.math.ttu.edu
#
# Run this script as
# <kevin@gibbon> ./gibbon-linux-sundance [flags]
# where the possible flags are listed by running
# <kevin@gibbon> ./gibbon-linux-sundance --help
#
# This isn't meant as a completely general configuration script; rather, it
# allows streamlined setting of the several options I most commonly vary in
# my own work. You'll probably want to tweak this script for your own system
# and your own selection of packages. In particular, I've assumed we're
# always building Sundance and that the directory layout is identical to
# that on my development machines gibbon and chimera.
#
# 22 March 2009
# Kevin Long (kevin.long@ttu.edu)
#
#-----------------------------------------------------------------------------
# Decide whether to build the SEACAS mesh IO package.
# Default is yes.
#
ENABLE_SEACAS=ON
# Decide whether to build Stokhos. Default is yes.
ENABLE_STOKHOS=ON
# Decide whether to build Zoltan mesh partitioning. Default is yes.
ENABLE_ZOLTAN=ON
# ----------------------------------------------------------------------------
# Set the fortran library name. On older Linux systems this will
# need to be changed to -lg2c.
#
FORTRAN_LIBS="-lgfortran"
# ----------------------------------------------------------------------------
# Set variables that control the type of build
#
#
# Whether to build PySundance
PY_SUNDANCE=OFF
# Whether to build shared libraries. Default=no.
BUILD_SHARED=ON
# Whether to build with MPI. Default=yes.
ENABLE_MPI=ON
# Whether to build optimized or debug. Default=debug. Set to RELEASE or leave
# blank to enable an optimized build.
BUILD_TYPE=DEBUG
# Whether to enable runtime checking of STL calls. Default=no.
# Do NOT enable this feature unless you know what you're doing, because if any
# other libraries were built without it the combination of enabled and
# disabled STL checking in a single executable will cause serious problems,
# i.e., segfaults in random places.
CHECK_STL=OFF
# Whether to enable a paranoid level of compiler warnings. This can cause
# problems with Python. Default: on.
PARANOID_COMPILER=ON
# Whether to do explicit template instantiation
EXPLICIT_TEMPLATES=ON
# Ordinal type (should normally be int)
ORDINAL_TYPE=int
# ----------------------------------------------------------------------------
# Verbosity of configuration
VERBOSE_CONFIGURE=OFF
EXTRA_C_FLAGS=
EXTRA_CXX_FLAGS=
# ----------------------------------------------------------------------------
# Set variables controlling which third-party libraries are available and
# should be linked in.
#
# Whether the exodus mesh database libraries are available. Default=yes.
ENABLE_NETCDF=ON
# ----------------------------------------------------------------------------
# Specify directories for the Trilinos source and Trilnos data, and for
# the installation of this build.
# Set the installation path
INSTALL_PREFIX=$PWD
# ---------------------------------------------------------------------------
#
# At this point, all variables have been assigned default values. We now
# parse the command line to see if any values are overridden.
#
# ---------------------------------------------------------------------------
# Argument parsing logic.
TEMP=`getopt -o x --long python,help,mpi,serial,shared,static,dryrun,verbose,check-stl,debug,opt,stohkos,no-stokhos,lib64,explicit,no-explicit,lax,ordinal:,src:,data:,prefix:,extra-cflags:,extra-cxxflags: -- "$@"`
eval set -- "$TEMP"
while true ; do
case "$1" in
--python) PY_SUNDANCE=ON;
PARANOID_COMPILER=OFF;
PYTHON_INC_STRING="-I${PYTHON_INC_PATH}";
shift ;;
--mpi) ENABLE_MPI=ON; shift ;;
--serial) ENABLE_MPI=OFF; shift ;;
--dryrun) ECHO=echo; shift;;
--verbose) VERBOSE_CONFIGURE=ON; shift;;
--shared) BUILD_SHARED=ON; shift;;
--static) BUILD_SHARED=OFF; shift;;
--check-stl) CHECK_STL=ON; shift;;
--debug) BUILD_TYPE=DEBUG; shift;;
--opt) BUILD_TYPE=RELEASE;
OPT_STR="-finline-functions -funroll-loops"; shift;;
--lax) PARANOID_COMPILER=OFF; shift;;
--lib64) LIB_PATH="${COMPILER_ROOT}/lib;${COMPILER_ROOT}/lib64"; shift;;
--explicit) EXPLICIT_TEMPLATES=ON; shift;;
--no-explicit) EXPLICIT_TEMPLATES=OFF; shift;;
--stokhos) ENABLE_STOKHOS=ON; shift;;
--no-stokhos) ENABLE_STOKHOS=OFF; shift;;
--src)
TRILINOS_SRC_DIR="$2"; shift 2;;
--extra-cxxflags)
EXTRA_CXX_FLAGS="$2"; shift 2;;
--extra-cflags)
EXTRA_C_FLAGS="$2"; shift 2;;
--extra-fflags)
EXTRA_F_FLAGS="$2"; shift 2;;
--data)
TRILINOS_DATA_DIR="$2"; shift 2;;
--ordinal)
ORDINAL_TYPE="$2"; shift 2;;
--prefix)
INSTALL_PREFIX="$2"; shift 2;;
--help)
echo "Command-line arguments:"
echo "--help help"
echo "--dryrun print the command that would be used"
echo "--python enables PySundance"
echo "--verbose enable verbose configuration (default: off)"
echo "--mpi enable MPI (default: on)"
echo "--serial turn off MPI"
echo "--shared build shared libraries (default: off)"
echo "--static build static libraries (default: on)"
echo "--check-stl turn on STL runtime checking (expert use only)"
echo "--debug turn on debugging features (default: on)"
echo "--opt turn on optimized compilation (default: off)"
echo "--lax turn off paranoid compiler flags (necessary for python wrappers)"
echo "--lib64 include lib64 in search path (default: off)"
echo "--explicit enable explicit template instantiation (default: on)"
echo "--src <srcdir> set location of Trilinos sources (default: \${HOME}/Code/Trilinos)"
echo "--extra-cxxflags <f> extra C++ flags (default: none)"
echo "--extra-cflags <f> extra C flags (default: none)"
echo "--extra-fflags <f> extra Fortran flags (default: none)"
echo "--ordinal <str> ordinal type (default: int)"
echo "--data <dir> set location of Trilinos data (default: \${HOME}/Code/TrilinosData)"
echo "--prefix <dir> set installation directory (default: \${PWD})"
echo " ";
exit 0;
shift
;;
--) shift; break;;
esac
done
# ---------------------------------------------------------------------------
#
# Now run cmake!!
#
# ---------------------------------------------------------------------------
${ECHO} cmake \
-D CMAKE_BUILD_TYPE:STRING=${BUILD_TYPE} \
-D BUILD_SHARED_LIBS:BOOL=${BUILD_SHARED} \
-D CMAKE_SYSTEM_LIBRARY_PATH:FILEPATH="${LIB_PATH}" \
-D CMAKE_SYSTEM_INCLUDE_PATH:FILEPATH="${INC_PATH}" \
-D CMAKE_CXX_FLAGS:STRING="${PYTHON_INC_STRING} ${OPT_STR} ${EXTRA_CXX_FLAGS}" \
-D CMAKE_C_FLAGS:STRING="${PYTHON_INC_STRING} ${EXTRA_C_FLAGS}" \
-D CMAKE_Fortran_FLAGS:STRING="${EXTRA_F_FLAGS}" \
-D TPL_ENABLE_MPI:BOOL=${ENABLE_MPI} \
-D TPL_ENABLE_Netcdf:BOOL=${ENABLE_NETCDF} \
-D TPL_HDF5_LIBRARIES:STRING="/usr/lib/libhdf5.so" \
-D Trilinos_EXTRA_LINK_FLAGS:STRING=${FORTRAN_LIBS} \
-D Trilinos_ENABLE_SHADOW_WARNINGS:BOOL=OFF \
-D Trilinos_ENABLE_ALL_OPTIONAL_PACKAGES:BOOL=OFF \
-D Trilinos_ENABLE_SECONDARY_STABLE_CODE:BOOL=ON \
-D Trilinos_ENABLE_STRONG_CXX_COMPILE_WARNINGS:BOOL=${PARANOID_COMPILER} \
-D Trilinos_ENABLE_CHECKED_STL:BOOL=${CHECK_STL} \
-D Trilinos_ENABLE_TESTS:BOOL=OFF \
-D Trilinos_ENABLE_EXAMPLES:BOOL=OFF \
-D Trilinos_ENABLE_EXPLICIT_INSTANTIATION:BOOL=${EXPLICIT_TEMPLATES} \
-D Trilinos_ENABLE_Sundance:BOOL=ON \
-D Trilinos_ENABLE_SEACAS:BOOL=${ENABLE_SEACAS} \
-D Trilinos_ENABLE_Sacado:BOOL=${ENABLE_SACADO} \
-D Trilinos_ENABLE_Stokhos:BOOL=${ENABLE_STOKHOS} \
-D Trilinos_ENABLE_Zoltan:BOOL=${ENABLE_ZOLTAN} \
-D Sundance_ENABLE_TESTS:BOOL=ON \
-D Sundance_ENABLE_EXAMPLES:BOOL=ON \
-D Stokhos_ENABLE_TESTS:BOOL=OFF \
-D Zoltan_ENABLE_TESTS:BOOL=OFF \
-D SEACAS_ENABLE_TESTS:BOOL=OFF \
-D EpetraExt_USING_HDF5:BOOL=OFF \
-D Trilinos_ENABLE_SEACASNemslice:BOOL=ON \
-D Trilinos_ENABLE_SEACASEpu:BOOL=OFF \
-D Stokhos_ENABLE_EXAMPLES:BOOL=OFF \
-D Sundance_ENABLE_Python:BOOL=${PY_SUNDANCE} \
-D Sundance_ENABLE_SEACAS:BOOL=${ENABLE_SEACAS} \
-D Teuchos_ORDINAL_TYPE:STRING=${ORDINAL_TYPE} \
-D Trilinos_DATA_DIR:FILEPATH="${TRILINOS_DATA_DIR}" \
-D NOX_ENABLE_LOCA:BOOL=OFF \
-D CMAKE_INSTALL_PREFIX:PATH=${INSTALL_PREFIX} \
${TRILINOS_SRC_DIR}
|
