1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
|
#!/usr/bin/env perl
use strict;
use warnings;
use lib ("/usr/lib/trinityrnaseq/PerlLib");
use Process_cmd;
use File::Basename;
my $usage = "usage: $0 collectl_dir/ \n\n";
my $collectl_dir = $ARGV[0] or die $usage;
main: {
my $cmd = "/usr/lib/trinityrnaseq/trinity-plugins/COLLECTL/util/collectl_dat_to_time_matrix.py --dat $collectl_dir/collectl.dat --out_prefix " . basename($collectl_dir);
&process_cmd($cmd);
$cmd = "/usr/lib/trinityrnaseq/trinity-plugins/COLLECTL/util/plot_time_vs_resource.Rscript " . basename($collectl_dir);
&process_cmd($cmd);
exit(0);
}
|
