File: run_ext_test_docker.sh

package info (click to toggle)
trinityrnaseq 2.11.0%2Bdfsg-6
  • links: PTS, VCS
  • area: main
  • in suites: bullseye, sid
  • size: 417,528 kB
  • sloc: perl: 48,420; cpp: 17,749; java: 12,695; python: 3,124; sh: 1,030; ansic: 983; makefile: 688; xml: 62
file content (11 lines) | stat: -rwxr-xr-x 302 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
#!/bin/bash

if [ ! -e trinity_ext_sample_data ]; then
    git clone https://github.com/trinityrnaseq/trinity_ext_sample_data.git
fi


docker run --rm -v `pwd`/trinity_ext_sample_data:/trinity_ext_sample_data \
       trinityrnaseq/trinityrnaseq \
       bash -c 'cd /trinity_ext_sample_data && make'