File: run_ext_test_docker.sh

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trinityrnaseq 2.15.2%2Bdfsg-1
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#!/bin/bash

if [ ! -e trinity_ext_sample_data ]; then
    git clone https://github.com/trinityrnaseq/trinity_ext_sample_data.git
fi


VERSION=`cat VERSION.txt`

docker run --rm -v `pwd`/trinity_ext_sample_data:/trinity_ext_sample_data \
       trinityrnaseq/trinityrnaseq:$VERSION \
       bash -c 'cd /trinity_ext_sample_data && make'