File: ReadManager.pm

package info (click to toggle)
trinityrnaseq 2.15.2%2Bdfsg-1
  • links: PTS, VCS
  • area: main
  • in suites: trixie
  • size: 468,004 kB
  • sloc: perl: 49,905; cpp: 17,993; java: 12,489; python: 3,282; sh: 1,989; ansic: 985; makefile: 717; xml: 62
file content (31 lines) | stat: -rw-r--r-- 345 bytes parent folder | download | duplicates (5) 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
 
package ReadManager;

use strict;
use warnings;
use Carp;


my $counter = 0;
my %read_acc_to_counter;


####
sub get_read_index {
	my ($read_acc) = @_;

	if (my $read_index = $read_acc_to_counter{$read_acc}) {
		
		return($read_index);
	}

	else {

		$counter++;
		$read_acc_to_counter{$read_acc} = $counter;

		return($counter);
	}
}

1; #EOM