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From: Michael R. Crusoe <crusoe@debian.org>
Subject: add standard CXXFLAGS CPPFLAGS to Chrysalis & scaffold_iworm_contigs
Forwarded: https://github.com/trinityrnaseq/Chrysalis/pull/1
and https://github.com/trinityrnaseq/trinityrnaseq/pull/1090
--- trinityrnaseq.orig/Chrysalis/Makefile
+++ trinityrnaseq/Chrysalis/Makefile
@@ -1,10 +1,10 @@
all:
mkdir -p build
- cd build && cmake -DCMAKE_INSTALL_PREFIX="" ../ && make DESTDIR=../ install
+ cd build && cmake -DCMAKE_INSTALL_PREFIX="" ../ && ${MAKE} DESTDIR=../ install
debug:
mkdir -p build
- cd build && cmake -DCMAKE_INSTALL_PREFIX="" -DCMAKE_BUILD_TYPE=Debug ../ && make DESTDIR=../ install
+ cd build && cmake -DCMAKE_INSTALL_PREFIX="" -DCMAKE_BUILD_TYPE=Debug ../ && ${MAKE} DESTDIR=../ install
clean:
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