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#!/usr/bin/env perl
use strict;
use warnings;
my $usage = "\n\nusage: $0 all_diff_expression_results.txt\n\n";
my $results_summary_file = $ARGV[0] or die $usage;
my @signif_results;
{
open (my $fh, $results_summary_file) or die "Error, cannot open file $results_summary_file";
while (<$fh>) {
chomp;
if (/^\#/) { next; }
my @x = split(/\t/);
my ($sampleA, $sampleB, $acc, $logFC, $logCPM, $pvalue, $fdr) = @x;
my $struct = { sampleA => $sampleA,
sampleB => $sampleB,
acc => $acc,
logFC => $logFC,
pvalue => $pvalue,
fdr => $fdr,
};
push (@signif_results, $struct);
}
close $fh;
}
print "<html>\n";
print "<table>\n";
print "<tr><th>.</th><th>" . join("</th><th>1e-", (1..10)) . "</th></tr>\n";
for my $min_logfc (1..10) {
my @counts;
print "<tr><th>" . 2**$min_logfc . "</th>";
for my $min_fdr (1..10) {
my %accs = map { $_->{acc} => 1 } grep { $_->{fdr} <= 10**(-1*$min_fdr) && $_->{logFC} >= $min_logfc } @signif_results;
my $count = scalar(keys %accs);
#print join("\t", $min_logfc, $min_fdr, $count) . "\n";
push (@counts, $count);
}
print "<td>" . join("</td><td>", @counts) . "</td><tr>\n";
}
print "</table>\n";
print "</html>\n";
exit(0);
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