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#!/usr/bin/env perl
use strict;
use warnings;
use FindBin;
## we delete all files we don't need in this directory. Be careful in case users try running it somewhere else, outside this dir.
chdir $FindBin::RealBin or die "error, cannot cd to $FindBin::RealBin";
my @files_to_keep = qw (
Trinity.seq_lengths
Trinotate_report.xls
Trinotate_report.xls.trans.gene_ontology
cleanme.pl
ds_induced_vs_log.factors
hs_induced_vs_log.factors
runMe.sh
);
my %keep = map { + $_ => 1 } @files_to_keep;
foreach my $file (<*>) {
if (! $keep{$file}) {
print STDERR "-removing file: $file\n";
unlink($file);
}
}
exit(0);
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