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trinityrnaseq 2.2.0%2Bdfsg-2
  • links: PTS, VCS
  • area: main
  • in suites: stretch
  • size: 212,452 kB
  • ctags: 5,067
  • sloc: perl: 45,552; cpp: 19,678; java: 11,865; sh: 1,485; makefile: 613; ansic: 427; python: 313; xml: 83

Folder: util

d .. (parent)
d d rwxr-xr-x 4,096 PBS
d d rwxr-xr-x 85 R
d d rwxr-xr-x 8,192 misc
d d rwxr-xr-x 4,096 support_scripts
- - rwxr-xr-x 4,497 SAM_nameSorted_to_uniq_count_stats.pl
- - rwxr-xr-x 3,467 TrinityStats.pl
- - rwxr-xr-x 7,912 abundance_estimates_to_matrix.pl
- - rwxr-xr-x 25,818 align_and_estimate_abundance.pl
- - rwxr-xr-x 8,024 analyze_blastPlus_topHit_coverage.pl
- - rwxr-xr-x 24,083 bowtie_PE_separate_then_join.pl
- - rwxr-xr-x 29,852 fasta_tool
- - rwxr-xr-x 11,537 filter_fasta_by_rsem_values.pl
- - rwxr-xr-x 8,713 filter_low_expr_transcripts.pl
- - rwxr-xr-x 26,857 insilico_read_normalization.pl
- - rwxr-xr-x 1,058 retrieve_sequences_from_fasta.pl
- - rwxr-xr-x 6,016 run_DE_analysis_from_samples_file.pl
- - rwxr-xr-x 7,313 run_RSEM_from_samples_file.pl
- - rwxr-xr-x 11,339 run_Trinity_edgeR_pipeline.pl
- - rwxr-xr-x 7,120 run_Trinity_from_samples_file.pl