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trinityrnaseq 2.6.6%2Bdfsg-6
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  • area: main
  • in suites: buster
  • size: 346,416 kB
  • sloc: perl: 47,542; cpp: 20,209; java: 12,484; python: 2,766; sh: 1,665; makefile: 895; ansic: 90; xml: 83

Folder: misc_run_tests

d .. (parent)
- - rwxr-xr-x 1,694 __runMe.diff_kmer_length.sh
- - rwxr-xr-x 1,021 __runMe_CuffFly.sh
- - rwxr-xr-x 1,021 __runMe_PasaFly.sh
- - rwxr-xr-x 390 __runMe_as_DS.sh
- - rwxr-xr-x 1,025 __runMe_bowtie_components.sh
- - rwxr-xr-x 451 __runMe_full_cleanup.sh
- - rwxr-xr-x 569 __runMe_include_long_reads.sh
- - rwxr-xr-x 444 __runMe_no_cleanup.sh
- - rwxr-xr-x 1,028 __runMe_parallel_iworm_assembly.sh
- - rwxr-xr-x 986 __runMe_piecemeal.sh
- - rwxr-xr-x 475 __runMe_trin_complete.sh
- - rwxr-xr-x 516 __runMe_use_bowtie2.sh
- - rwxr-xr-x 717 __runMe_use_my_ramdisk.sh
- - rwxr-xr-x 751 __runMe_use_workdir.sh
- - rwxr-xr-x 355 __runMe_using_Grid_LSF.sh
- - rwxr-xr-x 374 __runMe_using_Grid_SGE.sh
- - rwxr-xr-x 790 __runMe_w_monitoring.sh
- - rwxr-xr-x 754 __runMe_with_qual_trimming.sh
- - rwxr-xr-x 1,088 __runMe_with_qual_trimming_and_normalization.sh
- - rwxr-xr-x 1,124 __runMe_with_qual_trimming_and_normalize_libs_separately.sh
- - rwxr-xr-x 219 __run_PE_samples_file.min_kmer_cov_3.sh
- - rwxr-xr-x 171 __run_PE_samples_file.sh
- - rwxr-xr-x 171 __run_SE_samples_file.sh
- - rwxr-xr-x 876 __run_abundance_estimation_include_antisense.sh
- - rwxr-xr-x 1,561 __test_runMe.singleFQ.sh
- - rwxr-xr-x 766 __test_runMe_NO_normalization.sh
- - rw-r--r-- 222 __test_runMe_docker.sh
- - rwxr-xr-x 1,076 __test_runMe_include_normalization.sh
- - rwxr-xr-x 665 __test_runMe_lenient_path_extension.sh
- - rwxr-xr-x 232 __test_runMe_with_jaccard_clip.sh
- - rwxr-xr-x 540 runMe_no_qualTrim.sh