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tvc 5.0.3%2Bgit20151221.80e144e%2Bdfsg-2
  • links: PTS, VCS
  • area: main
  • in suites: buster
  • size: 3,548 kB
  • sloc: cpp: 24,088; ansic: 3,933; python: 260; makefile: 16

Folder: VariantCaller

d .. (parent)
d d rwxr-xr-x 4,096 Bookkeeping
d d rwxr-xr-x 4,096 EnsembleEval
d d rwxr-xr-x 124 Filter
d d rwxr-xr-x 38 IndelAssembly
d d rwxr-xr-x 70 Reads
d d rwxr-xr-x 4,096 Splice
d d rwxr-xr-x 4,096 tvcutils
- - rw-r--r-- 17,050 BAMWalkerEngine.cpp
- - rw-r--r-- 10,727 BAMWalkerEngine.h
- - rw-r--r-- 12,425 HandleVariant.cpp
- - rw-r--r-- 1,379 HandleVariant.h
- - rw-r--r-- 13,601 HotspotReader.cpp
- - rw-r--r-- 2,097 HotspotReader.h
- - rw-r--r-- 10,911 HypothesisEvaluator.cpp
- - rw-r--r-- 2,142 HypothesisEvaluator.h
- - rw-r--r-- 4,420 MetricsManager.cpp
- - rw-r--r-- 1,138 MetricsManager.h
- - rw-r--r-- 2,207 OrderedBAMWriter.cpp
- - rw-r--r-- 1,110 OrderedBAMWriter.h
- - rw-r--r-- 5,088 OrderedVCFWriter.h
- - rw-r--r-- 6,662 ReferenceReader.h
- - rw-r--r-- 4,418 SampleManager.cpp
- - rw-r--r-- 900 SampleManager.h
- - rw-r--r-- 13,379 TargetsManager.cpp
- - rw-r--r-- 1,226 TargetsManager.h
- - rw-r--r-- 12,528 VariantCaller.cpp