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"""This module attaches special functions to Expr.
This way we avoid circular dependencies between e.g.
Sum and its superclass Expr."""
# Copyright (C) 2008-2011 Martin Sandve Alnes
#
# This file is part of UFL.
#
# UFL is free software: you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# UFL is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with UFL. If not, see <http://www.gnu.org/licenses/>.
#
# First added: 2008-08-18
# Last changed: 2011-10-25
from itertools import chain
from ufl.log import error
from ufl.assertions import ufl_assert
from ufl.common import mergedicts, subdict, StackDict
from ufl.expr import Expr
from ufl.constantvalue import Zero, ScalarValue, FloatValue, IntValue, is_python_scalar, is_true_ufl_scalar, as_ufl, python_scalar_types
from ufl.algebra import Sum, Product, Division, Power, Abs
from ufl.tensoralgebra import Transposed, Dot
from ufl.indexing import IndexBase, FixedIndex, Index, Indexed, IndexSum, indices
from ufl.indexutils import repeated_indices, unique_indices, single_indices
from ufl.tensors import as_tensor
from ufl.restriction import PositiveRestricted, NegativeRestricted
from ufl.differentiation import SpatialDerivative, VariableDerivative
#--- Helper functions for product handling ---
def _mult(a, b):
# Discover repeated indices, which results in index sums
ai = a.free_indices()
bi = b.free_indices()
ii = ai + bi
ri = repeated_indices(ii)
# Pick out valid non-scalar products here (dot products):
# - matrix-matrix (A*B, M*grad(u)) => A . B
# - matrix-vector (A*v) => A . v
s1, s2 = a.shape(), b.shape()
r1, r2 = len(s1), len(s2)
if r1 == 2 and r2 in (1, 2):
ufl_assert(not ri, "Not expecting repeated indices in non-scalar product.")
# Check for zero, simplifying early if possible
if isinstance(a, Zero) or isinstance(b, Zero):
shape = s1[:-1] + s2[1:]
fi = single_indices(ii)
idims = mergedicts((a.index_dimensions(), b.index_dimensions()))
idims = subdict(idims, fi)
return Zero(shape, fi, idims)
# Return dot product in index notation
ai = indices(a.rank()-1)
bi = indices(b.rank()-1)
k = indices(1)
# Create an IndexSum over a Product
s = a[ai+k]*b[k+bi]
return as_tensor(s, ai+bi)
elif not (r1 == 0 and r2 == 0):
# Scalar - tensor product
if r2 == 0:
a, b = b, a
s1, s2 = s2, s1
# Check for zero, simplifying early if possible
if isinstance(a, Zero) or isinstance(b, Zero):
shape = s2
fi = single_indices(ii)
idims = mergedicts((a.index_dimensions(), b.index_dimensions()))
idims = subdict(idims, fi)
return Zero(shape, fi, idims)
# Repeated indices are allowed, like in:
#v[i]*M[i,:]
# Apply product to scalar components
ii = indices(b.rank())
p = Product(a, b[ii])
# Wrap as tensor again
p = as_tensor(p, ii)
# TODO: Should we apply IndexSum or as_tensor first?
# Apply index sums
for i in ri:
p = IndexSum(p, i)
return p
# Scalar products use Product and IndexSum for implicit sums:
p = Product(a, b)
for i in ri:
p = IndexSum(p, i)
return p
#--- Extend Expr with algebraic operators ---
_valid_types = (Expr,) + python_scalar_types
def _mul(self, o):
if not isinstance(o, _valid_types):
return NotImplemented
o = as_ufl(o)
return _mult(self, o)
Expr.__mul__ = _mul
def _rmul(self, o):
if not isinstance(o, _valid_types):
return NotImplemented
o = as_ufl(o)
return _mult(o, self)
Expr.__rmul__ = _rmul
def _add(self, o):
if not isinstance(o, _valid_types):
return NotImplemented
return Sum(self, o)
Expr.__add__ = _add
def _radd(self, o):
if not isinstance(o, _valid_types):
return NotImplemented
return Sum(o, self)
Expr.__radd__ = _radd
def _sub(self, o):
if not isinstance(o, _valid_types):
return NotImplemented
return Sum(self, -o)
Expr.__sub__ = _sub
def _rsub(self, o):
if not isinstance(o, _valid_types):
return NotImplemented
return Sum(o, -self)
Expr.__rsub__ = _rsub
def _div(self, o):
if not isinstance(o, _valid_types):
return NotImplemented
sh = self.shape()
if sh:
ii = indices(len(sh))
d = Division(self[ii], o)
return as_tensor(d, ii)
return Division(self, o)
Expr.__div__ = _div
Expr.__truediv__ = _div
def _rdiv(self, o):
if not isinstance(o, _valid_types):
return NotImplemented
return Division(o, self)
Expr.__rdiv__ = _rdiv
Expr.__rtruediv__ = _rdiv
def _pow(self, o):
if not isinstance(o, _valid_types):
return NotImplemented
return Power(self, o)
Expr.__pow__ = _pow
def _rpow(self, o):
if not isinstance(o, _valid_types):
return NotImplemented
return Power(o, self)
Expr.__rpow__ = _rpow
# TODO: Add Negated class for this? Might simplify reductions in Add.
def _neg(self):
return -1*self
Expr.__neg__ = _neg
def _abs(self):
return Abs(self)
Expr.__abs__ = _abs
#--- Extend Expr with restiction operators a("+"), a("-") ---
def _restrict(self, side):
if side == "+":
return PositiveRestricted(self)
if side == "-":
return NegativeRestricted(self)
error("Invalid side %r in restriction operator." % side)
#Expr.__call__ = _restrict
def _call(self, arg, mapping=None):
# Taking the restriction?
if arg in ("+", "-"):
ufl_assert(mapping is None, "Not expecting a mapping when taking restriction.")
return _restrict(self, arg)
# Evaluate expression at this particular coordinate,
# with provided values for other terminals in mapping
if mapping is None:
mapping = {}
component = ()
index_values = StackDict()
from ufl.algorithms import expand_derivatives
if arg is None:
dim = None
elif isinstance(arg, (tuple, list)):
dim = len(arg)
else: # No type checking here...
dim = 1
f = expand_derivatives(self, dim)
return f.evaluate(arg, mapping, component, index_values)
Expr.__call__ = _call
#--- Extend Expr with the transpose operation A.T ---
def _transpose(self):
"""Transposed a rank two tensor expression. For more general transpose
operations of higher order tensor expressions, use indexing and Tensor."""
return Transposed(self)
Expr.T = property(_transpose)
#--- Extend Expr with indexing operator a[i] ---
def analyse_key(ii, rank):
"""Takes something the user might input as an index tuple
inside [], which could include complete slices (:) and
ellipsis (...), and returns tuples of actual UFL index objects.
The return value is a tuple (indices, axis_indices),
each being a tuple of IndexBase instances.
The return value 'indices' corresponds to all
input objects of these types:
- Index
- FixedIndex
- int => Wrapped in FixedIndex
The return value 'axis_indices' corresponds to all
input objects of these types:
- Complete slice (:) => Replaced by a single new index
- Ellipsis (...) => Replaced by multiple new indices
"""
if not isinstance(ii, tuple):
ii = (ii,)
# Convert all indices to Index or FixedIndex objects.
# If there is an ellipsis, split the indices into before and after.
axis_indices = set()
pre = []
post = []
indexlist = pre
for i in ii:
if i == Ellipsis:
# Switch from pre to post list when an ellipsis is encountered
ufl_assert(indexlist is pre, "Found duplicate ellipsis.")
indexlist = post
else:
# Convert index to a proper type
if isinstance(i, int):
idx = FixedIndex(i)
elif isinstance(i, IndexBase):
idx = i
elif isinstance(i, slice):
if i == slice(None):
idx = Index()
axis_indices.add(idx)
else:
# TODO: Use ListTensor to support partial slices?
error("Partial slices not implemented, only complete slices like [:]")
else:
error("Can't convert this object to index: %r" % i)
# Store index in pre or post list
indexlist.append(idx)
# Handle ellipsis as a number of complete slices,
# that is create a number of new axis indices
num_axis = rank - len(pre) - len(post)
ellipsis_indices = indices(num_axis)
axis_indices.update(ellipsis_indices)
# Construct final tuples to return
all_indices = tuple(chain(pre, ellipsis_indices, post))
axis_indices = tuple(i for i in all_indices if i in axis_indices)
return all_indices, axis_indices
def _getitem(self, key):
# Analyse key, getting rid of slices and the ellipsis
r = self.rank()
indices, axis_indices = analyse_key(key, r)
# Special case for foo[...] => foo
if len(indices) == len(axis_indices):
return self
# Index self, yielding scalar valued expressions
a = Indexed(self, indices)
# Make a tensor from components designated by axis indices
if axis_indices:
a = as_tensor(a, axis_indices)
# TODO: Should we apply IndexSum or as_tensor first?
# Apply sum for each repeated index
ri = repeated_indices(self.free_indices() + indices)
for i in ri:
a = IndexSum(a, i)
# Check for zero (last so we can get indices etc from a)
if isinstance(self, Zero):
shape = a.shape()
fi = a.free_indices()
idims = subdict(a.index_dimensions(), fi)
a = Zero(shape, fi, idims)
return a
Expr.__getitem__ = _getitem
#--- Extend Expr with spatial differentiation operator a.dx(i) ---
def _dx(self, *ii):
"Return the partial derivative with respect to spatial variable number i."
d = self
# Apply all derivatives
for i in ii:
d = SpatialDerivative(d, i)
# Apply all implicit sums
ri = repeated_indices(self.free_indices() + ii)
for i in ri:
d = IndexSum(d, i)
return d
Expr.dx = _dx
#def _d(self, v):
# "Return the partial derivative with respect to variable v."
# # TODO: Maybe v can be an Indexed of a Variable, in which case we can use indexing to extract the right component?
# return VariableDerivative(self, v)
#Expr.d = _d
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