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Description: removing _neon signatures to avoid build failure on aarch64
Author: Pierre Gruet <pgt@debian.org>
Forwarded: https://github.com/ugeneunipro/ugene/issues/1681
Last-Update: 2024-10-04
--- a/src/libs_3rdparty/samtools/src/samtools_core/htslib/htscodecs/htscodecs/rANS_static32x16pr.h
+++ b/src/libs_3rdparty/samtools/src/samtools_core/htslib/htscodecs/htscodecs/rANS_static32x16pr.h
@@ -145,28 +145,6 @@
#endif // HAVE_AVX512
//----------------------------------------------------------------------
-// Arm Neon implementation
-#if defined(__ARM_NEON) && defined(__aarch64__)
-unsigned char *rans_compress_O0_32x16_neon(unsigned char *in,
- unsigned int in_size,
- unsigned char *out,
- unsigned int *out_size);
-
-unsigned char *rans_uncompress_O0_32x16_neon(unsigned char *in,
- unsigned int in_size,
- unsigned char *out,
- unsigned int out_sz);
-
-unsigned char *rans_compress_O1_32x16_neon(unsigned char *in,
- unsigned int in_size,
- unsigned char *out,
- unsigned int *out_size);
-
-unsigned char *rans_uncompress_O1_32x16_neon(unsigned char *in,
- unsigned int in_size,
- unsigned char *out,
- unsigned int out_sz);
-#endif // ARM_NEON
#ifdef __cplusplus
}
--- a/src/libs_3rdparty/samtools/src/samtools_core/htslib/htscodecs/htscodecs/rANS_static4x16pr.c
+++ b/src/libs_3rdparty/samtools/src/samtools_core/htslib/htscodecs/htscodecs/rANS_static4x16pr.c
@@ -1066,11 +1066,6 @@
unsigned int *out_size) {
if (do_simd) {
- if ((rans_cpu & RANS_CPU_ENC_NEON) && have_neon())
- return order & 1
- ? rans_compress_O1_32x16_neon
- : rans_compress_O0_32x16_neon;
- else
return order & 1
? rans_compress_O1_32x16
: rans_compress_O0_32x16;
@@ -1089,11 +1084,6 @@
unsigned int out_size) {
if (do_simd) {
- if ((rans_cpu & RANS_CPU_DEC_NEON) && have_neon())
- return order & 1
- ? rans_uncompress_O1_32x16_neon
- : rans_uncompress_O0_32x16_neon;
- else
return order & 1
? rans_uncompress_O1_32x16
: rans_uncompress_O0_32x16;
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