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ugene 51.0%2Bdfsg-3
  • links: PTS, VCS
  • area: main
  • in suites: trixie
  • size: 125,712 kB
  • sloc: cpp: 637,632; xml: 212,751; ansic: 81,474; javascript: 5,416; sh: 1,204; python: 771; makefile: 36

Folder: tests

d .. (parent)
d d rwxr-xr-x 4,096 annotation_utils
d d rwxr-xr-x 96 annotator
d d rwxr-xr-x 34 asn_stress_test
d d rwxr-xr-x 4,096 bowtie
d d rwxr-xr-x 38 bowtie2
d d rwxr-xr-x 4,096 bwa
d d rwxr-xr-x 40 cmdline
d d rwxr-xr-x 38 cufflinks
d d rwxr-xr-x 4,096 dna_assembly
d d rwxr-xr-x 78 dna_export
d d rwxr-xr-x 4,096 dna_statistics
d d rwxr-xr-x 4,096 doc_format
d d rwxr-xr-x 4,096 edit_alignment
d d rwxr-xr-x 62 edit_sequence
d d rwxr-xr-x 4,096 enzymes
d d rwxr-xr-x 26 et
d d rwxr-xr-x 4,096 find_algorithm
d d rwxr-xr-x 84 find_pattern_in_alignment
d d rwxr-xr-x 4,096 format_detection
d d rwxr-xr-x 29 genome_aligner
d d rwxr-xr-x 48 guiscript
d d rwxr-xr-x 58 gurl
d d rwxr-xr-x 72 hmm2
d d rwxr-xr-x 27 hmm3
d d rwxr-xr-x 67 indexing_files
d d rwxr-xr-x 154 load_remote_document
d d rwxr-xr-x 4,096 ma_consensus
d d rwxr-xr-x 4,096 mrbayes
d d rwxr-xr-x 4,096 neighbor_join
d d rwxr-xr-x 148 orf_marker
d d rwxr-xr-x 34 pdb_stress_test
d d rwxr-xr-x 115 phyml
d d rwxr-xr-x 52 position_weight_matrix
d d rwxr-xr-x 57,344 prefab4
d d rwxr-xr-x 4,096 primer3
d d rwxr-xr-x 50 project
d d rwxr-xr-x 106 ptools
d d rwxr-xr-x 87 query_designer
d d rwxr-xr-x 4,096 realign_sequences_in_alignment
d d rwxr-xr-x 4,096 regression
d d rwxr-xr-x 58 remote_query
d d rwxr-xr-x 58 remote_request
d d rwxr-xr-x 138 repeat_finder
d d rwxr-xr-x 67 sec_struct_predict
d d rwxr-xr-x 4,096 sequence_walker
d d rwxr-xr-x 40 sitecon
d d rwxr-xr-x 4,096 smatrices
d d rwxr-xr-x 56 smith_waterman
d d rwxr-xr-x 85 smith_waterman2
d d rwxr-xr-x 145 smith_waterman_big
d d rwxr-xr-x 44 smith_waterman_perf
d d rwxr-xr-x 53 smith_waterman_perf_2
d d rwxr-xr-x 89 snp_effect
d d rwxr-xr-x 130 subaligniment
d d rwxr-xr-x 4,096 task
d d rwxr-xr-x 4,096 umuscle
d d rwxr-xr-x 52 unit_tests
d d rwxr-xr-x 25 vcf_consensus
- - rw-r--r-- 938 PrecommitTests_x64.list
- - rw-r--r-- 122 annotation_utils_suite.xml
- - rw-r--r-- 134 annotator_suite.xml
- - rw-r--r-- 161 asn_stress_test_suite.xml
- - rw-r--r-- 131 bowtie2_suite.xml
- - rw-r--r-- 311 bowtie_suite.xml
- - rw-r--r-- 123 bwa_suite.xml
- - rw-r--r-- 4,540 cmdline_common_suite.xml
- - rw-r--r-- 470 cmdline_suite.xml
- - rw-r--r-- 123 create_subaligniment_suite.xml
- - rw-r--r-- 169 cufflinks_suite.xml
- - rw-r--r-- 1,914 dna_assembly_suite.xml
- - rw-r--r-- 117 dna_export_suite.xml
- - rw-r--r-- 118 dna_statistics_suite.xml
- - rw-r--r-- 133 doc_format_suite.xml
- - rw-r--r-- 119 edit_alignment_suite.xml
- - rw-r--r-- 117 edit_sequence_suite.xml
- - rw-r--r-- 265 enzymes_suite.xml
- - rw-r--r-- 94 et_suite.xml
- - rw-r--r-- 136 find_algorithm_suite.xml
- - rw-r--r-- 198 find_pattern_in_alignment.xml
- - rw-r--r-- 133 format_detection_suite.xml
- - rw-r--r-- 120 genome_aligner.xml
- - rw-r--r-- 142 gurl_suite.xml
- - rw-r--r-- 226 hmm2_sse_suite.xml
- - rw-r--r-- 105 hmm2_suite.xml
- - rw-r--r-- 106 hmm3_suite.xml
- - rw-r--r-- 132 indexing_files_suite.xml
- - rw-r--r-- 124 load_remote_document.xml
- - rw-r--r-- 141 ma_consensus_suite.xml
- - rw-r--r-- 104 mrbayes_test_suite.xml
- - rw-r--r-- 134 neighbor_join_suite.xml
- - rw-r--r-- 134 orf_marker_suite.xml
- - rw-r--r-- 161 pdb_stress_test_suite.xml
- - rw-r--r-- 100 phyml_test_suite.xml
- - rw-r--r-- 1,878 primer3_suite.xml
- - rw-r--r-- 104 project_suite.xml
- - rw-r--r-- 110 ptools_suite.xml
- - rw-r--r-- 152 pwm_suite.xml
- - rw-r--r-- 123 qd_suite.xml
- - rw-r--r-- 208 realign_sequences_in_alignment.xml
- - rw-r--r-- 111 regression_wd_suite.xml
- - rw-r--r-- 258 remote_query_suite.xml
- - rw-r--r-- 396 remote_request_suite.xml
- - rw-r--r-- 475 repeat_finder.xml
- - rw-r--r-- 138 repeat_finder_long.xml
- - rw-r--r-- 131 sec_struct_predict_suite.xml
- - rw-r--r-- 136 seq_walker_suite.xml
- - rw-r--r-- 110 sitecon_suite.xml
- - rw-r--r-- 138 smatrices.xml
- - rw-r--r-- 193 smith_waterman2.xml
- - rw-r--r-- 196 smith_waterman2_big.xml
- - rw-r--r-- 183 smith_watermanSSE2.xml
- - rw-r--r-- 186 smith_watermanSSE2_big.xml
- - rw-r--r-- 136 smith_waterman_perf.xml
- - rw-r--r-- 138 smith_waterman_perf_2.xml
- - rw-r--r-- 404 smith_waterman_suite.xml
- - rw-r--r-- 191 smith_waterman_suite_big.xml
- - rw-r--r-- 169 task_suite.xml
- - rw-r--r-- 267 umuscle_parallel_prefab4_suite.xml
- - rw-r--r-- 288 umuscle_parallel_suite.xml
- - rw-r--r-- 265 umuscle_serial_prefab4_suite.xml
- - rw-r--r-- 198 umuscle_serial_suite.xml
- - rw-r--r-- 3,217 vcf_consensus_suite.xml
- - rw-r--r-- 203 wd_rw_ali_suite.xml
- - rw-r--r-- 987 wd_rw_assembly_suite.xml
- - rw-r--r-- 184 wd_rw_db_suite.xml
- - rw-r--r-- 201 wd_rw_seq_suite.xml
- - rw-r--r-- 199 wd_rw_txt_suite.xml
- - rw-r--r-- 181 wd_validation_suite.xml