File: test_0001.xml

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<multi-test>

    <load-document index="doc" url="annotator/seq_with_promoter.fa" io="local_file" format="fasta"/>

    <find-object-by-name index="seq" doc="doc" name="seq_with_T7" type="OT_SEQUENCE"/>

    <custom-auto-annotation-search doc="doc" seq="seq_with_T7" result="plasmid_annotations" circular="false"/>

    <find-annotation-by-name index="ann1" obj="plasmid_annotations" name="T7_promoter"/>

    <check-annotation-location annotation="ann1" location="247..265" complement="0"/>

    <check-annotation-sequence annotation="ann1" sequence="seq" value="TAATACGACTCACTATAGG"/>

    <find-annotation-by-name index="ann2" obj="plasmid_annotations" name="pBRrevBam_primer"/>

    <check-annotation-location annotation="ann2" location="381..400" complement="1"/>


</multi-test>