File: 2local_gzip.xml

package info (click to toggle)
ugene 51.0%2Bdfsg-3
  • links: PTS, VCS
  • area: main
  • in suites: trixie
  • size: 125,712 kB
  • sloc: cpp: 637,632; xml: 212,751; ansic: 81,474; javascript: 5,416; sh: 1,204; python: 771; makefile: 36
file content (17 lines) | stat: -rw-r--r-- 889 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
<multi-test>

    <!-- try to get specified document from gzipped index file created on local file and check fasta sequences -->

    <generate-file input="indexing_files/fasta/local_file.fa" amount="2000" outCtxName="tmpOut1" gzipOut="yes"/>

    <generate-file input="indexing_files/fasta/local_file3_item.fa" amount="1000" outCtxName="tmpOut2" gzipOut=""/>

    <create-file-index tmpInput="yes" input="tmpOut1,tmpOut2" output="2bfa_local_gz_file.uind.gz" delete="yes"/>
    <load-document index="indDoc" dir="temp" url="2bfa_local_gz_file.uind.gz" io="local_file_gzip"
                   format="index"/>
    <get-doc-from-index indDocName="indDoc" docNum="6700" docCtxName="outDoc"/>

    <load-document index="trueDoc" url="indexing_files/fasta/local_file3_item.fa" io="local_file" format="fasta"/>
    <compare-sequences-in-two-objects doc="outDoc" value="trueDoc"/>

</multi-test>