1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39
|
<?xml version="1.0" ?>
<multi-test>
<load-document index="doc" url="primer3/primer3_xml/internal/boundary_test_11.fa" io="local_file" format="fasta"/>
<find-object-by-name index="seq" doc="doc" name="boundary_test_11" type="OT_SEQUENCE"/>
<plugin_primer_3 sequence="seq">
<plugin_primer_3_in
PRIMER_MAX_POLY_X="0"
PRIMER_INTERNAL_MAX_POLY_X="0"
PRIMER_EXPLAIN_FLAG="1"
PRIMER_PRODUCT_SIZE_RANGE="80-80"
PRIMER_MIN_TM="0.0"
PRIMER_MAX_TM="100.0"
PRIMER_MIN_SIZE="24"
PRIMER_MAX_SIZE="24"
PRIMER_INTERNAL_MIN_SIZE="25"
PRIMER_INTERNAL_MAX_SIZE="25"
PRIMER_INTERNAL_OPT_SIZE="25"
PRIMER_OPT_SIZE="24"
PRIMER_MAX_GC="100"
PRIMER_MIN_GC="0"
PRIMER_MAX_SELF_END="100"
PRIMER_MAX_SELF_ANY="100"
PRIMER_PAIR_MAX_COMPL_ANY="100"
PRIMER_PAIR_MAX_COMPL_END="100"
PRIMER_INTERNAL_MAX_SELF_ANY="100"
PRIMER_INTERNAL_MAX_SELF_END="100"
PRIMER_INTERNAL_MAX_TM="100"
PRIMER_INTERNAL_MIN_TM="30"
PRIMER_INTERNAL_MAX_GC="100"
PRIMER_INTERNAL_MIN_GC="0"
PRIMER_PICK_INTERNAL_OLIGO="1"
PRIMER_MAX_NS_ACCEPTED="1"/>
<plugin_primer_3_out
PRIMER_LEFT_NUM_RETURNED="0"
PRIMER_RIGHT_NUM_RETURNED="0"
PRIMER_INTERNAL_NUM_RETURNED="0"
PRIMER_PAIR_NUM_RETURNED="0"/>
</plugin_primer_3>
</multi-test>
|