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#@UGENE_WORKFLOW
#For all incoming sequences, dump sequence name and sequence size to output
workflow "Dump sequence info"{
Script-Dump-sequence-info {
type:"Script-Dump Sequence Info";
name:"Dump sequence info";
script {
out_text=getName(in_sequence) + ": " + size(in_sequence);
};
}
read-sequence {
type:read-sequence;
name:"Read sequence";
merge-gap:10;
mode:0;
}
write-text {
type:write-text;
name:"Write plain text";
accumulate:true;
write-mode:2;
url-out:info.txt;
}
read-sequence.sequence->Script-Dump-sequence-info.in.sequence
Script-Dump-sequence-info.text->write-text.in-text.text
.meta {
visual {
Script-Dump-sequence-info {
pos:"-555 -585";
style:ext;
bg-color-ext:"0 128 128 64";
in.angle:180;
out.angle:360;
}
read-sequence {
pos:"-780 -585";
style:ext;
bg-color-ext:"0 128 128 64";
out-sequence.angle:360;
}
write-text {
pos:"-360 -585";
style:ext;
bg-color-ext:"0 128 128 64";
in-text.angle:180;
}
read-sequence.out-sequence->Script-Dump-sequence-info.in {
text-pos:"-27.5 -24";
}
Script-Dump-sequence-info.out->write-text.in-text {
text-pos:"-32.5 -24";
}
}
wizard {
name:"Dump sequence info Wizard";
help-page-id:16122709;
auto-run: true;
page {
id:1;
next:2;
title:"Input sequence(s)";
parameters-area {
read-sequence.url-in {
type:datasets;
}
}
}
page {
id:2;
title:"Output data";
parameters-area {
group {
title:"Output data";
label-size:120;
write-text.url-out {
label:"Result file";
}
write-text.accumulate {
label:"Accumulate results";
}
}
}
}
}
}
}
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