1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356
|
function umfpack_make
% UMFPACK_MAKE
%
% Compiles the UMFPACK mexFunction and then runs a simple demo.
%
% See also: umfpack, umfpack_details, umfpack_report, umfpack_demo, and
% umfpack_simple.
%
% UMFPACK Version 4.4, Copyright (c) 2005 by Timothy A. Davis.
% All Rights Reserved. Type umfpack_details for License.
help umfpack_make
fprintf ('\n--------------------------------------------------------------\n') ;
fprintf ('Now compiling the UMFPACK and AMD mexFunctions.\n') ;
fprintf ('--------------------------------------------------------------\n') ;
try
% ispc does not appear in MATLAB 5.3
pc = ispc ;
catch
% if ispc fails, assume we aren't on a Windows PC.
pc = 0 ;
end
obj = 'o' ;
blas_lib = '' ;
if (pc)
obj = 'obj' ;
end
%-------------------------------------------------------------------------------
% BLAS option
%-------------------------------------------------------------------------------
msg = [ ...
'\nUsing the BLAS is faster, but might not compile correctly.\n', ...
'If you get an error stating that dgemm, dgemv, dger, zgemm,\n', ...
'zgemv, and/or zger are not defined, then recompile without the\n', ...
'BLAS. You can ignore warnings that these routines are implicitly\n', ...
'declared.\n\nPlease select one of the following options: \n', ...
' 1: attempt to compile with the BLAS (default)\n', ...
' 2: do not use the BLAS\n'] ;
fprintf (msg) ;
blas = input (': ') ;
if (isempty (blas))
blas = 1 ;
end
if (blas == 1)
% try to link to MATLAB's built-in BLAS
blas = '' ;
if (pc)
% the default lcc compiler needs this library to access the BLAS
blas_lib = ' libmwlapack.lib' ;
msg = [ ...
'\nCheck to see if you have a file called libmwlapack.lib in the\n', ...
'<matlab>\\extern\\lib\\win32\\lcc\\ directory, where <matlab> is ', ...
'the\ndirectory where MATLAB is installed. If a file of that ', ...
'name is already\nthere, then you don''t have to do anything. ', ...
'Otherwise, you must first\ncopy the libmwlapack.lib file from ', ...
'the umfpack\\lcc_lib\\ directory to the\n', ...
'<matlab>\\extern\\lib\\win32\\lcc\\ directory. Next, type\n\n', ...
' mex -setup\n\n', ...
'at the MATLAB prompt, and ask MATLAB to select the lcc compiler. ',...
'You can skip\nall of this if you have already done it, or have ', ...
'configured mex to use\na different compiler. If you are using ', ...
'Norton anti-virus software on Windows\n98SE, then you need to ', ...
'exit MATLAB, turn off virus checking, and restart MATLAB\n', ...
'before you can use the mex command or compile UMFPACK.\n', ...
'You may also need to turn off virus checking in other cases.\n', ...
'\nHit enter to continue, or type control-C if you do not wish to '] ;
fprintf (msg) ;
input ('proceed: ') ;
end
fprintf ('\nUsing the BLAS (recommended).\n') ;
else
% No BLAS
fprintf ('\nNot using the BLAS. UMFPACK will be slow.\n') ;
blas = ' -DNBLAS' ;
end
%-------------------------------------------------------------------------------
% -DNUTIL option (using utMalloc or mxMalloc)
%-------------------------------------------------------------------------------
utils = '' ;
if (~pc)
msg = [ ...
'--------------------------------------------------------------\n', ...
'\nUMFPACK uses MATLAB''s memory allocation routines. The internal', ...
'\nutMalloc, utFree, and utRealloc allow for better use of memory,', ...
'\nbut they are internal utility routines that are not documented.\n', ...
'Thus, they might not always work. Using mxMalloc, mxFree, and\n', ...
'mxRealloc works, but UMFPACK might run out of memory when solving\n', ...
'problems that it could otherwise solve. Try using the default.\n', ...
'If you get an error stating that utMalloc, utFree, and/or\n', ...
'utRealloc are not defined, then recompile with the mx* routines.\n', ...
'\nPlease select one of the following options:\n', ...
' 1: attempt to use the ut* routines (default)\n', ...
' 2: use the standard mx* routines\n'] ;
fprintf (msg) ;
utils = input (': ') ;
if (isempty (utils))
utils = 1 ;
end
if (utils == 2)
fprintf ('\nNot using utMalloc, utFree, or utRealloc\n') ;
utils = ' -DNUTIL' ;
else
fprintf ('\nUsing utMalloc, utFree, and utRealloc\n') ;
utils = '' ;
end
end
%-------------------------------------------------------------------------------
% -DNPOSIX option (for sysconf and times timer routines)
%-------------------------------------------------------------------------------
posix = '' ;
if (~pc)
msg = [ ...
'--------------------------------------------------------------\n', ...
'\nUMFPACK can use the POSIX routines sysconf () and times ()\n', ...
'to provide CPU time and wallclock time statistics. If you do not\n', ...
'have a POSIX-compliant operating system, then UMFPACK won''t\n', ...
'compile. If you don''t know which option to pick, try the\n', ...
'default. If you get an error saying that sysconf and/or times\n', ...
'are not defined, then recompile with the non-POSIX option.\n', ...
'\nPlease select one of the following options:\n', ...
' 1: use POSIX sysconf and times routines (default)\n', ...
' 2: do not use POSIX routines\n'] ;
fprintf (msg) ;
posix = input (': ') ;
if (isempty (posix))
posix = 1 ;
end
if (posix == 2)
fprintf ('\nNot using POSIX sysconf and times routines.\n') ;
posix = ' -DNPOSIX' ;
else
fprintf ('\nUsing POSIX sysconf and times routines.\n') ;
posix = '' ;
end
end
%-------------------------------------------------------------------------------
% mex command
%-------------------------------------------------------------------------------
umfdir = sprintf ('..%sSource%s', filesep, filesep) ;
amddir = sprintf ('..%s..%sAMD%sSource%s', filesep, filesep, filesep, filesep) ;
incdir = sprintf ( ...
' -I..%sInclude -I..%sSource -I..%s..%sAMD%sInclude -I..%s..%sAMD%sSource', ...
filesep,filesep, filesep, filesep, filesep, filesep, filesep, filesep) ;
mx = sprintf ('mex -inline -O%s%s%s%s', blas, utils, posix, incdir) ;
msg = [ ...
'--------------------------------------------------------------\n', ...
'\nCompile options:\n%s\nNow compiling. Please wait.\n'] ;
fprintf (msg, mx) ;
% The following is adapted from GNUmakefile
%-------------------------------------------------------------------------------
% source files
%-------------------------------------------------------------------------------
% non-user-callable umf_*.[ch] files:
umfch = { 'assemble', 'blas3_update', ...
'build_tuples', 'create_element', ...
'dump', 'extend_front', 'garbage_collection', ...
'get_memory', 'init_front', 'kernel', ...
'kernel_init', 'kernel_wrapup', ...
'local_search', 'lsolve', 'ltsolve', ...
'mem_alloc_element', 'mem_alloc_head_block', ...
'mem_alloc_tail_block', 'mem_free_tail_block', ...
'mem_init_memoryspace', ...
'report_vector', 'row_search', 'scale_column', ...
'set_stats', 'solve', 'symbolic_usage', 'transpose', ...
'tuple_lengths', 'usolve', 'utsolve', 'valid_numeric', ...
'valid_symbolic', 'grow_front', 'start_front', '2by2', ...
'store_lu', 'scale' } ;
% non-user-callable umf_*.[ch] files, int versions only (no real/complex):
umfint = { 'analyze', 'apply_order', 'colamd', 'free', 'fsize', ...
'is_permutation', 'malloc', 'realloc', 'report_perm', ...
'singletons' } ;
% non-user-callable and user-callable amd_*.[ch] files (int versions only):
amd = { 'aat', '1', '2', 'dump', 'postorder', 'post_tree', 'defaults', ...
'order', 'control', 'info', 'valid', 'preprocess' } ;
% user-callable umfpack_*.[ch] files (real/complex):
user = { 'col_to_triplet', 'defaults', 'free_numeric', ...
'free_symbolic', 'get_numeric', 'get_lunz', ...
'get_symbolic', 'get_determinant', 'numeric', 'qsymbolic', ...
'report_control', 'report_info', 'report_matrix', ...
'report_numeric', 'report_perm', 'report_status', ...
'report_symbolic', 'report_triplet', ...
'report_vector', 'solve', 'symbolic', ...
'transpose', 'triplet_to_col', 'scale' ...
'load_numeric', 'save_numeric', 'load_symbolic', 'save_symbolic' } ;
% user-callable umfpack_*.[ch], only one version
generic = { 'timer', 'tictoc' } ;
M = cell (0) ;
%-------------------------------------------------------------------------------
% Create the umfpack and amd mexFunctions for MATLAB (int versions only)
%-------------------------------------------------------------------------------
for k = 1:length(umfint)
M = make (M, '%s -DDINT -c %sumf_%s.c', 'umf_%s.%s', 'umf_%s_%s.%s', ...
mx, umfint {k}, umfint {k}, 'm', obj, umfdir) ;
end
rules = { [mx ' -DDINT'] , [mx ' -DZINT'] } ;
kinds = { 'md', 'mz' } ;
for what = 1:2
rule = rules {what} ;
kind = kinds {what} ;
M = make (M, '%s -DCONJUGATE_SOLVE -c %sumf_%s.c', 'umf_%s.%s', ...
'umf_%s_%s.%s', rule, 'ltsolve', 'lhsolve', kind, obj, umfdir) ;
M = make (M, '%s -DCONJUGATE_SOLVE -c %sumf_%s.c', 'umf_%s.%s', ...
'umf_%s_%s.%s', rule, 'utsolve', 'uhsolve', kind, obj, umfdir) ;
M = make (M, '%s -DDO_MAP -c %sumf_%s.c', 'umf_%s.%s', ...
'umf_%s_%s_map_nox.%s', rule, 'triplet', 'triplet', kind, obj, umfdir) ;
M = make (M, '%s -DDO_VALUES -c %sumf_%s.c', 'umf_%s.%s', ...
'umf_%s_%s_nomap_x.%s', rule, 'triplet', 'triplet', kind, obj, umfdir) ;
M = make (M, '%s -c %sumf_%s.c', 'umf_%s.%s', ...
'umf_%s_%s_nomap_nox.%s', rule, 'triplet', 'triplet', kind, obj, ...
umfdir) ;
M = make (M, '%s -DDO_MAP -DDO_VALUES -c %sumf_%s.c', 'umf_%s.%s', ...
'umf_%s_%s_map_x.%s', rule, 'triplet', 'triplet', kind, obj, umfdir) ;
M = make (M, '%s -DFIXQ -c %sumf_%s.c', 'umf_%s.%s', ...
'umf_%s_%s_fixq.%s', rule, 'assemble', 'assemble', kind, obj, umfdir) ;
M = make (M, '%s -DDROP -c %sumf_%s.c', 'umf_%s.%s', ...
'umf_%s_%s_drop.%s', rule, 'store_lu', 'store_lu', kind, obj, umfdir) ;
for k = 1:length(umfch)
M = make (M, '%s -c %sumf_%s.c', 'umf_%s.%s', 'umf_%s_%s.%s', ...
rule, umfch {k}, umfch {k}, kind, obj, umfdir) ;
end
M = make (M, '%s -DWSOLVE -c %sumfpack_%s.c', 'umfpack_%s.%s', ...
'umfpack_%s_w%s.%s', rule, 'solve', 'solve', kind, obj, umfdir) ;
for k = 1:length(user)
M = make (M, '%s -c %sumfpack_%s.c', 'umfpack_%s.%s', ...
'umfpack_%s_%s.%s', rule, user {k}, user {k}, kind, obj, umfdir) ;
end
end
for k = 1:length(generic)
M = make (M, '%s -c %sumfpack_%s.c', 'umfpack_%s.%s', ...
'umfpack_%s_%s.%s', mx, generic {k}, generic {k}, 'm', obj, umfdir) ;
end
%----------------------------------------
% AMD routines (int only)
%----------------------------------------
for k = 1:length(amd)
M = make (M, '%s -DDINT -c %samd_%s.c', 'amd_%s.%s', 'amd_%s_%s.%s', ...
mx, amd {k}, amd {k}, 'm', obj, amddir) ;
end
%----------------------------------------
% compile the umfpack mexFunction
%----------------------------------------
C = sprintf ('%s -output umfpack umfpackmex.c', mx) ;
for i = 1:length (M)
C = [C ' ' (M {i})] ;
end
C = [C ' ' blas_lib] ;
cmd (C) ;
%----------------------------------------
% delete the object files
%----------------------------------------
for i = 1:length (M)
rmfile (M {i}) ;
end
%----------------------------------------
% compile the luflop mexFunction
%----------------------------------------
cmd (sprintf ('%s -output luflop luflopmex.c', mx)) ;
fprintf ('\n\nCompilation has completed. Now trying the umfpack_simple demo.\n');
umfpack_simple
%-------------------------------------------------------------------------------
% rmfile: delete a file, but only if it exists
%-------------------------------------------------------------------------------
function rmfile (file)
if (length (dir (file)) > 0)
delete (file) ;
end
%-------------------------------------------------------------------------------
% cpfile: copy the src file to the filename dst, overwriting dst if it exists
%-------------------------------------------------------------------------------
function cpfile (src, dst)
rmfile (dst)
if (length (dir (src)) == 0)
help umfpack_make
error (sprintf ('File does not exist: %s\n', src)) ;
end
copyfile (src, dst) ;
%-------------------------------------------------------------------------------
% mvfile: move the src file to the filename dst, overwriting dst if it exists
%-------------------------------------------------------------------------------
function mvfile (src, dst)
cpfile (src, dst) ;
rmfile (src) ;
%-------------------------------------------------------------------------------
% cmd: display and execute a command
%-------------------------------------------------------------------------------
function cmd (s)
fprintf ('.') ;
eval (s) ;
%-------------------------------------------------------------------------------
% make: execute a "make" command for a source file
%-------------------------------------------------------------------------------
function M = make (M, s, src, dst, rule, file1, file2, kind, obj, srcdir)
cmd (sprintf (s, rule, srcdir, file1)) ;
src = sprintf (src, file1, obj) ;
dst = sprintf (dst, kind, file2, obj) ;
mvfile (src, dst) ;
M {end + 1} = dst ;
|