File: cmp-test-a.vcf

package info (click to toggle)
vcftools 0.1.12%2Bdfsg-1
  • links: PTS, VCS
  • area: main
  • in suites: jessie, jessie-kfreebsd
  • size: 1,680 kB
  • ctags: 1,215
  • sloc: cpp: 12,118; perl: 10,973; ansic: 1,467; pascal: 1,064; makefile: 67; php: 57; sh: 12
file content (12 lines) | stat: -rw-r--r-- 638 bytes parent folder | download | duplicates (7)
1
2
3
4
5
6
7
8
9
10
11
12
##fileformat=VCFv4.0
##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	A	B
1	100100	.	G	C	0	.	DP=1	GT:GQ:DP	0|1:40:1	0/1:40:1
1	100200	.	G	C	0	.	DP=1	GT:GQ:DP	0|1:40:1	0/0:40:1
1	100300	.	G	C	0	.	DP=1	GT:GQ:DP	1/1:40:1	./.:40:1
1	100400	.	C	G,T	35	.	DP=1	GT:GQ:DP	1/1:41:1	0/2:40:1
1	100500	.	A	G	0	.	DP=1	GT:GQ:DP	1/1:40:1	0/0:40:1
1	100600	.	C	G	0	.	DP=1	GT:GQ:DP	1/1:40:1	0/0:40:1