File: subset.SNPs.out

package info (click to toggle)
vcftools 0.1.17-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 1,928 kB
  • sloc: cpp: 14,154; perl: 11,657; ansic: 1,467; sh: 135; makefile: 105
file content (10 lines) | stat: -rw-r--r-- 522 bytes parent folder | download | duplicates (7)
1
2
3
4
5
6
7
8
9
10
##fileformat=VCFv4.0
##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
##FILTER=<ID=q10,Description="Quality below 10">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	A
1	100	.	G	C	1806	q10	DP=35	GT:GQ:DP	1/1:409:35
1	120	.	T	G	628	q10	DP=21	GT:GQ:DP	0|1|1:21:21
1	130	.	GAA	GTA	1016	PASS	DP=22	GT:GQ:DP	0/1:212:22