1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21
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##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
##FILTER=<ID=q10,Description="Quality below 10">
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B
1 100 . G C 1806 q10 DP=35 GT:GQ:DP 1/1:409:35 1/1:409:35
1 110 . C . 1792 PASS DP=32 GT:GQ:DP 0/0:245:32 0/0:245:32
1 120 . T G 628 q10 DP=21 GT:GQ:DP 0|1|1:21:21 0|1|1:21:21
1 130 . GAA G,GTA 1016 PASS DP=22 GT:GQ:DP 1/2:212:22 1/2:212:22
1 140 . GT G 727 PASS DP=30 GT:GQ:DP 0/1:150:30 0/1:150:30
1 150 . TAAAA TA,T 246 PASS DP=10 GT:GQ:DP 1/2:12:10 1/2:12:10
1 160 . TAAAA TA,T 246 PASS DP=10 GT:GQ:DP 1/2:12:10 1/2:12:10
2 100 . GTTT G 1806 q10 DP=35 GT:GQ:DP 0/1:409:35 0/1:409:35
2 110 . CAAA C 1792 PASS DP=32 GT:GQ:DP 0/1:245:32 0/1:245:32
2 120 . GA G 628 q10 DP=21 GT:GQ:DP 1/1:21:21 1/1:21:21
2 130 . GAA G 1016 PASS DP=22 GT:GQ:DP 0/1:212:22 0/1:212:22
2 140 . GT G 727 PASS DP=30 GT:GQ:DP 0/1:150:30 0/1:150:30
2 150 . TAAAA TA,T 246 PASS DP=10 GT:GQ:DP 1/2:12:10 1/2:12:10
2 160 . TAAAA TA,T 246 PASS DP=10 GT:GQ:DP 1/2:12:10 1/2:12:10
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