File: fmt_auto_mode.t

package info (click to toggle)
velvet 1.2.10%2Bdfsg1-7
  • links: PTS, VCS
  • area: main
  • in suites: bullseye
  • size: 56,204 kB
  • sloc: ansic: 22,940; perl: 1,194; python: 295; sh: 125; makefile: 121
file content (23 lines) | stat: -rwxr-xr-x 576 bytes parent folder | download | duplicates (5)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
# load shared functions and variables
. `dirname $0`/run-tests.functions

# velveth binary
$VH $DIR/fmtAuto_fai.bin $K -create_binary -shortPaired -fmtAuto $FAI > /dev/null
$VH $DIR/fmtAuto_fqi.bin $K -create_binary -shortPaired -fmtAuto $FQI > /dev/null

# check fai
cmp -s $ROADMAP $DIR/fmtAuto_fai.bin/Roadmaps
if [ $? -ne 0 ]; then
  problem "$FAI binary mode Roadmap differs to $ROADMAP"
else
  inform "ok"
fi

# check fqi
cmp -s $ROADMAP $DIR/fmtAuto_fqi.bin/Roadmaps
if [ $? -ne 0 ]; then
  problem "$FQI binary mode Roadmap differs to $ROADMAP"
else
  inform "ok"
fi